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KshitizGIT committed Dec 10, 2024
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4 changes: 2 additions & 2 deletions 2019/04/30/pos_clinical_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>POS Tagger Clinical | pos_clinical | Healthcare NLP 2.0.2</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionSets a Part-Of-Speech tag to each word within a sentence.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU ...pos = PerceptronModel.pretrained("pos_clinical","en","clinical/models")\ .setInputCols(["token","sentence"])\ .setOutputCol("pos")pos_pipeline = Pipeline(stages=[document_ass...">
<meta name="description" content="DescriptionSets a Part-Of-Speech tag to each word within a sentence.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU ...pos = PerceptronModel.pretrained("pos_clinical","en","clinical/models")\ .setInputCols(["token","sentence"])\ .setOutputCol("pos")pos_pipeline = ...">
<!-- <link rel="canonical" href="/2019/04/30/pos_clinical_en.html"> -->
<link rel="canonical" href="/2019/04/30/pos_clinical_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -523,7 +523,7 @@ <h1>POS Tagger Clinical</h1><div class="top-subtitle mont"></div></header></div>
<h2 class="h2_title" id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="p">...</span>
<span class="n">pos</span> <span class="o">=</span> <span class="n">PerceptronModel</span><span class="p">.</span><span class="n">pretrained</span><span class="p">(</span><span class="s">"pos_clinical"</span><span class="p">,</span><span class="s">"en"</span><span class="p">,</span><span class="s">"clinical/models"</span><span class="p">)</span>\
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4 changes: 2 additions & 2 deletions 2019/06/04/deidentify_rb_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>Deidentify RB | deidentify_rb | Healthcare NLP 2.0.2</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionAnonymization and DeIdentification model based on outputs from DeId NERs and Replacement Dictionaries.Predicted EntitiesPersonal Information in order to deidentify.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU ...nlpPipeline = Pipeline(stages=[documentAssembler, sentenceDetector,...">
<meta name="description" content="DescriptionAnonymization and DeIdentification model based on outputs from DeId NERs and Replacement Dictionaries.Predicted EntitiesPersonal Information in order to deidentify.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU ...nlpPipeline = Pipeline(stages=[documen...">
<!-- <link rel="canonical" href="/2019/06/04/deidentify_rb_en.html"> -->
<link rel="canonical" href="/2019/06/04/deidentify_rb_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -525,7 +525,7 @@ <h2 id="predicted-entities">Predicted Entities</h2>
<h2 id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="p">...</span>
<span class="n">nlpPipeline</span> <span class="o">=</span> <span class="n">Pipeline</span><span class="p">(</span><span class="n">stages</span><span class="o">=</span><span class="p">[</span><span class="n">documentAssembler</span><span class="p">,</span> <span class="n">sentenceDetector</span><span class="p">,</span> <span class="n">tokenizer</span><span class="p">,</span> <span class="n">word_embeddings</span><span class="p">,</span> <span class="n">clinical_ner</span><span class="p">,</span> <span class="n">ner_converter</span><span class="p">])</span>
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4 changes: 2 additions & 2 deletions 2020/01/28/embeddings_clinical_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>Embeddings Clinical | embeddings_clinical | Healthcare NLP 2.4.0</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionWord Embeddings lookup annotator that maps tokens to vectors.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU model = WordEmbeddingsModel.pretrained("embeddings_clinical","en","clinical/models")\ .setInputCols("document","token")\ .setOutputCol("word_embeddings") val model = Word...">
<meta name="description" content="DescriptionWord Embeddings lookup annotator that maps tokens to vectors.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU model = WordEmbeddingsModel.pretrained("embeddings_clinical","en","clinical/models")\ .setInputCols("document","token")\ .setOutputCol("word_emb...">
<!-- <link rel="canonical" href="/2020/01/28/embeddings_clinical_en.html"> -->
<link rel="canonical" href="/2020/01/28/embeddings_clinical_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -523,7 +523,7 @@ <h1>Embeddings Clinical</h1><div class="top-subtitle mont"></div></header></div>
<h2 class="h2_title" id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="n">model</span> <span class="o">=</span> <span class="n">WordEmbeddingsModel</span><span class="p">.</span><span class="n">pretrained</span><span class="p">(</span><span class="s">"embeddings_clinical"</span><span class="p">,</span><span class="s">"en"</span><span class="p">,</span><span class="s">"clinical/models"</span><span class="p">)</span>\
<span class="p">.</span><span class="n">setInputCols</span><span class="p">(</span><span class="s">"document"</span><span class="p">,</span><span class="s">"token"</span><span class="p">)</span>\
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4 changes: 2 additions & 2 deletions 2020/01/31/clinical_deidentification_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>Clinical Deidentification | clinical_deidentification | Healthcare NLP 2.4.0</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionThis pipeline can be used to de-identify PHI information from medical texts. The PHI information will be obfuscated in the resulting text.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU from sparknlp.pretrained import PretrainedPipelinesample = """Name : Hendrickson, Ora, Record da...">
<meta name="description" content="DescriptionThis pipeline can be used to de-identify PHI information from medical texts. The PHI information will be obfuscated in the resulting text.Live DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU from sparknlp.pretrained import PretrainedPipelinesample = """Name ...">
<!-- <link rel="canonical" href="/2020/01/31/clinical_deidentification_en.html"> -->
<link rel="canonical" href="/2020/01/31/clinical_deidentification_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -524,7 +524,7 @@ <h2 class="h2_title" id="how-to-use">How to use</h2>

<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="kn">from</span> <span class="nn">sparknlp.pretrained</span> <span class="kn">import</span> <span class="n">PretrainedPipeline</span>

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4 changes: 2 additions & 2 deletions 2020/03/26/embeddings_healthcare_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>Embeddings Healthcare | embeddings_healthcare | Healthcare NLP 2.4.4</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionWord Embeddings lookup annotator that maps tokens to vectors.Data SourceTrained on PubMed + ICD10 + UMLS + MIMIC III corporahttps://www.nlm.nih.gov/databases/download/pubmed_medline.htmlLive DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU model = WordEmbeddingsModel.pretrained("embeddin...">
<meta name="description" content="DescriptionWord Embeddings lookup annotator that maps tokens to vectors.Data SourceTrained on PubMed + ICD10 + UMLS + MIMIC III corporahttps://www.nlm.nih.gov/databases/download/pubmed_medline.htmlLive DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU model = WordEmbeddi...">
<!-- <link rel="canonical" href="/2020/03/26/embeddings_healthcare_en.html"> -->
<link rel="canonical" href="/2020/03/26/embeddings_healthcare_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -527,7 +527,7 @@ <h2 class="h2_title" id="data-source">Data Source</h2>
<h2 class="h2_title" id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="n">model</span> <span class="o">=</span> <span class="n">WordEmbeddingsModel</span><span class="p">.</span><span class="n">pretrained</span><span class="p">(</span><span class="s">"embeddings_healthcare"</span><span class="p">,</span><span class="s">"en"</span><span class="p">,</span><span class="s">"clinical/models"</span><span class="p">)</span>\
<span class="p">.</span><span class="n">setInputCols</span><span class="p">([</span><span class="s">"document"</span><span class="p">,</span><span class="s">"token"</span><span class="p">])</span>\
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4 changes: 2 additions & 2 deletions 2020/04/17/spellcheck_clinical_en.html
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})(window,document,'script','dataLayer','GTM-59JLR64');</script>
<!-- End Google Tag Manager --><title>Contextual SpellChecker Clinical | spellcheck_clinical | Healthcare NLP 2.4.2</title><meta property="og:title" content=""/>

<meta name="description" content="DescriptionImplements Noisy Channel Model Spell Algorithm. Correction candidates are extracted combining context information and word informationLive DemoOpen in ColabDownloadCopy S3 URIHow to use PythonJSLScalaNLU model = ContextSpellCheckerModel.pretrained("spellcheck_clinical","en","clinical/models") .setInputC...">
<meta name="description" content="DescriptionImplements Noisy Channel Model Spell Algorithm. Correction candidates are extracted combining context information and word informationLive DemoOpen in ColabDownloadCopy S3 URIHow to use PythonHealthcare NLPPythonJohnSnowLabsScalaNLU model = ContextSpellCheckerModel.pretrained("spellcheck_clinical","en",...">
<!-- <link rel="canonical" href="/2020/04/17/spellcheck_clinical_en.html"> -->
<link rel="canonical" href="/2020/04/17/spellcheck_clinical_en.html"><link rel="alternate" type="application/rss+xml" title="Spark NLP" href="/feed.xml"><!-- start favicons snippet, use https://realfavicongenerator.net/ -->
<!---->
Expand Down Expand Up @@ -522,7 +522,7 @@ <h1>Contextual SpellChecker Clinical</h1><div class="top-subtitle mont"></div></
<h2 class="h2_title" id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="n">model</span> <span class="o">=</span> <span class="n">ContextSpellCheckerModel</span><span class="p">.</span><span class="n">pretrained</span><span class="p">(</span><span class="s">"spellcheck_clinical"</span><span class="p">,</span><span class="s">"en"</span><span class="p">,</span><span class="s">"clinical/models"</span><span class="p">)</span>
<span class="p">.</span><span class="n">setInputCols</span><span class="p">(</span><span class="s">"token"</span><span class="p">)</span>
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2 changes: 1 addition & 1 deletion 2020/04/21/ner_posology_small_en.html
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Expand Up @@ -526,7 +526,7 @@ <h2 class="h2_title" id="predicted-entities">Predicted Entities</h2>
<h2 class="h2_title" id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="n">document_assembler</span> <span class="o">=</span> <span class="n">DocumentAssembler</span><span class="p">()</span>\
<span class="p">.</span><span class="n">setInputCol</span><span class="p">(</span><span class="s">"text"</span><span class="p">)</span>\
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2 changes: 1 addition & 1 deletion 2020/04/22/ner_cancer_genetics_en.html
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Expand Up @@ -525,7 +525,7 @@ <h2 id="predicted-entities">Predicted Entities</h2>
<h2 id="how-to-use">How to use</h2>
<div class="tabs-box">

<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python</button><button class="tab-li-model-aproach tab-li-jsl">JSL</button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>
<div class="tabs-model-aproach-head"><button class="tab-li-model-aproach tabheader_active">Python<strong>Healthcare NLP</strong></button><button class="tab-li-model-aproach tab-li-jsl">Python<strong>JohnSnowLabs</strong></button><button class="tab-li-model-aproach">Scala</button><button class="tab-li-model-aproach tab-li-nlu">NLU</button></div>

<div class="language-python highlighter-rouge"><div class="highlight"><pre class="highlight"><code><span class="p">...</span>
<span class="n">word_embeddings</span> <span class="o">=</span> <span class="n">WordEmbeddingsModel</span><span class="p">.</span><span class="n">pretrained</span><span class="p">(</span><span class="s">"embeddings_clinical"</span><span class="p">,</span> <span class="s">"en"</span><span class="p">,</span> <span class="s">"clinical/models"</span><span class="p">)</span>\
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