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Update index.rst
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wendelljpereira committed Feb 8, 2022
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Expand Up @@ -71,6 +71,20 @@ Asc_seurat relies on multiple R packages. Please, visit the :ref:`references <re
Release notes
=============

* v2.2 - **Release on February 8th, 2022**

- Add the capacity to load a clustered dataset in the tab for the individual sample analysis.
- Add the capacity to load a clustered dataset in the tab for the integrated sample analysis.
- Genes identified as mitochondrial genes via the regex expression are now shown to the users.
- Changes the color scheme of the dynverse's plots to match the color scheme used by Seurat's plots.
- Small changes in the interface to improve usability.

- Fix a bug in the download of markers identified for multiple clusters in the integrated dataset. If a gene was identified as a marker in multiple clusters, a number was appended in the gene's name.
- Fix a bug that caused the app to crash when searching for conserved markers in an integrated dataset, and the gene was not expressed in one or more of the samples.
- Fix a bug where plots were exported with a dark background.
- Fix a bug in the advanced plots that caused expressed genes not to be identified. When using integrated datasets, the function now looks for the RNA assay instead of the integrated assay.
- Fix a bug where the app would crash when downloading the plots generated in the trajectory inference tab.

* v2.1 - **Released on May 26th, 2021**.

- Changes the assay used for differential expression analysis and visualization to "RNA" when using SCTransform normalization. Therefore, "SCT" assay is used for the steps until clustering the data.
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