Dice

##Occasionally Dishonest Casino Model

[Durbin, R., Eddy, S., Krogh, A., Mitchison, G., Biological Sequence Analysis: Probabilistic models of proteins and nucleic acids. Cambride University Press, 1998, pg 54]

#STOCHHMM MODEL FILE
MODEL INFORMATION
======================================================
MODEL_NAME:	CASINO DICE MODEL
MODEL_DESCRIPTION:	Taken from CH3 Durbin/Eddy
MODEL_CREATION_DATE:	August 28,2009

TRACK SYMBOL DEFINITIONS
======================================================
DICE:	1,2,3,4,5,6

STATE DEFINITIONS
#############################################
STATE:	
	NAME:	INIT
TRANSITION:	STANDARD: P(X)
	FAIR:	0.5
	LOADED:	0.5
#############################################
STATE:	
	NAME:	FAIR
	PATH_LABEL:	F
	GFF_DESC:	FAIR
TRANSITION:	STANDARD: P(X)
	FAIR:	0.95
	LOADED:	0.05
	END:	1
EMISSION:	DICE: P(X)
	ORDER:	0
@1		2		3		4		5		6
0.167	0.167	0.167	0.167	0.167	0.167
#############################################
STATE:
	NAME:	LOADED
	PATH_LABEL:	L
	GFF_DESC:	LOADED
TRANSITION:	STANDARD: P(X)
	FAIR:	0.1
	LOADED:	0.9
	END:	1
EMISSION:	DICE: P(X)
	ORDER:	0
@1	2	3	4	5	6	
0.1	0.1	0.1	0.1	0.1	0.5
#############################################
//END