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Ilo#74

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AF-55 wants to merge 202 commits intoLCAV:mainLCAV/LenslessPiCam:mainfrom AF-55:iloAF-55/LenslessPiCam:iloCopy head branch name to clipboard

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Commits

Commits on Apr 25, 2023

• notes.txt to test the branches

  

  Aaron Fargeon

  committed
  1abb1da

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Commits on May 11, 2023

• masks folder, notebook to test FlatCam

  

  Aaron Fargeon

  committed
  f4e3935

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• added dimensions to simulate PSF

  

  Aaron Fargeon

  committed
  a45cff3

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• MURA masks with different sizes

  

  Aaron Fargeon

  committed
  8df7426

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• psf simulation notebook

  

  Aaron Fargeon

  committed
  c139660

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• inverted colormaps for MURA

  

  Aaron Fargeon

  committed
  5a95094

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• new masks with inverted colormap

  

  Aaron Fargeon

  committed
  2dcd242

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• minor changes

  

  Aaron Fargeon

  committed
  81e1980

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• PhlatCam notebooks and masks creation

  

  Aaron Fargeon

  committed
  e73b565

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• FZA notebooks and masks creation

  

  Aaron Fargeon

  committed
  d684709

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• PNG masks for the website

  

  Aaron Fargeon

  committed
  2ea368a

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• PNG masks for the website

  

  Aaron Fargeon

  committed
  e71de45

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• fixed blank images

  

  Aaron Fargeon

  committed
  48615b6

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• change MLS sequence

  

  Aaron Fargeon

  committed
  4681b8f

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• testing new MLS sequence generator

  

  Aaron Fargeon

  committed
  2eb2d0d

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• edge detection

  

  Aaron Fargeon

  committed
  b6663c1

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• testing new MLS sequence generator

  

  Aaron Fargeon

  committed
  59617c9

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• inp

  

  Aaron Fargeon

  committed
  ba7e8f0

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• folders for MURA masks and MLS masks

  

  Aaron Fargeon

  committed
  7b20178

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• removed axis on MLS

  

  Aaron Fargeon

  committed
  07ec4dd

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• captioning

  

  Aaron Fargeon

  committed
  8c45427

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• rectangular shape

  

  Aaron Fargeon

  committed
  c259566

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• deleting images

  

  Aaron Fargeon

  committed
  18a01de

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• higher dimension mask

  

  Aaron Fargeon

  committed
  63c3dc3

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• different sizes and periods

  

  Aaron Fargeon

  committed
  6bd6da1

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• iterative phase retrieval notebook

  

  Aaron Fargeon

  committed
  478ce3f

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• bigger plot titles

  

  Aaron Fargeon

  committed
  beb99cd

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• iterative phase retrieval attempt

  

  Aaron Fargeon

  committed
  ff3cfb5

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• near-fresnel phase retrieval

  

  Aaron Fargeon

  committed
  9da780e

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• testing fresnel on fza

  

  Aaron Fargeon

  committed
  f4bf5bf

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• print shapes

  

  Aaron Fargeon

  committed
  ac5cc3d

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• mask class py file

  

  Aaron Fargeon

  committed
  ecf975b

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• change edges shape

  

  Aaron Fargeon

  committed
  cfa4bda

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• mask generation test

  

  Aaron Fargeon

  committed
  b577e53

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• mask_class rename

  

  Aaron Fargeon

  committed
  65929b6

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Commits on May 15, 2023

• removed settings file

  

  Aaron Fargeon

  committed
  72a2c17

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• answering pull request

  

  Aaron Fargeon

  committed
  95872cd

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• Merge branch 'main' into masks

  

  Aaron Fargeon

  committed
  bceb10b

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• testing phase retrieval

  

  Aaron Fargeon

  committed
  7d2ac90

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• added to gitignore

  

  Aaron Fargeon

  committed
  bedbae0

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• add psf computation

  

  Aaron Fargeon

  committed
  62dfafa

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Commits on May 16, 2023

• added notebooks to gitignore

  

  Aaron Fargeon

  committed
  64e2a69

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• removed notebooks from tracking

  

  Aaron Fargeon

  committed
  b9b3aa0

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• removed from tracking

  

  Aaron Fargeon

  committed
  3dd8dd7

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• add IPYNB, PNG and NPY

  

  Aaron Fargeon

  committed
  9c21a9f

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• removed simulated PSF images

  

  Aaron Fargeon

  committed
  2e7df4e

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• 2nd pull request comments

  

  Aaron Fargeon

  committed
  eda68f4

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Commits on May 17, 2023

• mapping values from [-π,π] to [0,2π]

  

  Aaron Fargeon

  committed
  210ce26

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• corrected PhaseContour

  

  Aaron Fargeon

  committed
  b267cce

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• adding forward propagation coherence test

  

  Aaron Fargeon

  committed
  95c988d

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Commits on May 23, 2023

• added formasks folders

  

  Aaron Fargeon

  committed
  1cee06b

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Commits on May 24, 2023

• added celeba_mini dataset

  

  Aaron Fargeon

  committed
  b69e82d

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• Fix simulation examples for 3D.

  ebezzam

  committed
  5ec2868

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• merge with LCAV/fix_simulation_examples

  

  Aaron Fargeon

  committed
  5b0890c

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• Fix single file example.

  ebezzam

  committed
  7cb34f3

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• Add function to set initial estimate.

  ebezzam

  committed
  538fe6f

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• Add message if reset=False

  ebezzam

  committed
  c3c2521

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• Update CHANGELOG

  ebezzam

  committed
  f2e2450

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Commits on May 25, 2023

• Merge remote-tracking branch 'upstream/fix_simulation_examples' into masks

  

  Aaron Fargeon

  committed
  15fda8b

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• scripts/sim/test_single_file.py

  

  Aaron Fargeon

  committed
  6a3ead2

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Commits on May 26, 2023

• added scripts/sim/test_dataset.py

  

  Aaron Fargeon

  committed
  5e791ba

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Commits on May 31, 2023

• added CodedAperture upscaling

  

  Aaron Fargeon

  committed
  956db17

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• corrected CodedAperture rows and columns

  

  Aaron Fargeon

  committed
  ea65341

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• testing upscaling

  

  Aaron Fargeon

  committed
  42068a7

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Commits on Jun 6, 2023

• added roundint to have 0s and 1s in upscaled MLS mask

  

  Aaron Fargeon

  committed
  3fd0769

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Commits on Jun 8, 2023

• squared amplitude PSF

  

  Aaron Fargeon

  committed
  2c045bb

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• making FZA mask binary

  

  Aaron Fargeon

  committed
  b7a588d

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• making FZA mask binary

  

  Aaron Fargeon

  committed
  27bda12

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• 3D PSF

  

  Aaron Fargeon

  committed
  ebeb0ff

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Commits on Jun 12, 2023

• simplified phase contour

  

  Aaron Fargeon

  committed
  2eedf40

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Commits on Jun 15, 2023

• changing upscaled coded aperture mask into int

  

  Aaron Fargeon

  committed
  5d97f40

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• added cloned flatcam repo by tanjasper

  

  Aaron Fargeon

  committed
  e145931

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Commits on Jun 20, 2023

• inverted dimensions for FZA

  

  Aaron Fargeon

  committed
  9c059ab

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Commits on Jun 27, 2023

• Merge branch 'main' into masks

  

  Aaron Fargeon

  committed
  820e54a

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Commits on Jun 28, 2023

• from_sensor class method

  

  Aaron Fargeon

  committed
  5ae52f0

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• testing from_sensor class method

  

  Aaron Fargeon

  committed
  65a4d19

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• fixed PhaseContour broadcast error

  

  Aaron Fargeon

  committed
  4ff7f1d

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• fixed first 3 tests

  

  Aaron Fargeon

  committed
  31d8d39

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Commits on Jun 29, 2023

• added from_sensor tests for phase contour and FZA

  

  Aaron Fargeon

  committed
  c538bf7

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• upscaling for phase contour, removed default args from from_sensor, comments

  

  Aaron Fargeon

  committed
  ec1d9bf

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Commits on Jul 4, 2023

• removed simulation-related files

  

  Aaron Fargeon

  committed
  33771b3

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• Merge branch 'main' of https://github.com/AF-55/LenslessPiCam into masks

  

  Aaron Fargeon

  committed
  acf8e76

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• placing mask.py in hardware module

  

  Aaron Fargeon

  committed
  252deb0

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• corrected import

  

  Aaron Fargeon

  committed
  bc7dfd7

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• add requirements for mask tests

  

  Aaron Fargeon

  committed
  9f29d9d

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• removed 4 channel requirement

  

  Aaron Fargeon

  committed
  23ee16c

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• added warnings about feature size for PhaseContour

  

  Aaron Fargeon

  committed
  70f862d

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• sensor_dict copy in from_name

  

  Aaron Fargeon

  committed
  3b8bd2a

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• copies of sensor attributes in from_sensor

  

  Aaron Fargeon

  committed
  44b7abc

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• no global variables, if main condition

  

  Aaron Fargeon

  committed
  9508a65

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Commits on Jul 7, 2023

• Fix overwriting of sensor parameters.

  ebezzam

  committed
  c1ffa07

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• Refactor names, compute PSF over different wv.

  ebezzam

  committed
  fcf8a2b

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• Update tests and requirements.

  ebezzam

  committed
  bef7ca9

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• Update CHANGELOG.

  ebezzam

  committed
  085f5ca

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• Added header, corrected docstrings

  

  Aaron Fargeon

  committed
  fa0e9e0

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• removed useless requirements

  

  Aaron Fargeon

  committed
  6770fca

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• added mask

  

  Aaron Fargeon

  committed
  e802bb7

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• created mask rst file

  

  Aaron Fargeon

  committed
  3cb2cc3

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• FIx documentation config to render mask module.

  ebezzam

  committed
  b63385a

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• Update mask docstrings.

  ebezzam

  committed
  11146e1

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• added Phase Contour and FZA

  

  Aaron Fargeon

  committed
  4c1d8a0

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Commits on Jul 11, 2023

• corrected docstring

  

  Aaron Fargeon

  committed
  73f6b9f

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• corrected docstring

  

  Aaron Fargeon

  committed
  4ff5d25

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• Fix docstrings.

  ebezzam

  committed
  7b9aab3

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• Add target_psf docstring.

  ebezzam

  committed
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Commits on Jul 13, 2023

• Changed the FZA radius from px to meters

  

  Aaron Fargeon

  committed
  06e4482

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• Merge branch 'masks' of https://github.com/AF-55/LenslessPiCam into masks

  

  Aaron Fargeon

  committed
  365ed56

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• Changed FZA radius from pixels to meters

  

  Aaron Fargeon

  committed
  1425663

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Commits on Jul 14, 2023

• Added FlatCam authors' data for simulation

  

  Aaron Fargeon

  committed
  c699ae5

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• Replaced scipy.ndimage.zoom by lensless.utils.image.resize for uscpaling

  

  Aaron Fargeon

  committed
  c71a29c

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Commits on Jul 17, 2023

• minor changes

  

  Aaron Fargeon

  committed
  b002820

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• FlatCam recon and sim file

  

  Aaron Fargeon

  committed
  107121f

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Commits on Jul 18, 2023

• deletion (replaced by tikhonov

  

  Aaron Fargeon

  committed
  cea6019

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• Corrected docstrings

  

  Aaron Fargeon

  committed
  320e4ca

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• fixed bayer2rgb

  

  Aaron Fargeon

  committed
  ef582e8

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• Created reconstruction class, adapter rgb2bayer to different patterns

  

  Aaron Fargeon

  committed
  9f0956f

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Commits on Jul 19, 2023

• Docstrings

  

  Aaron Fargeon

  committed
  c874a90

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• Added conversions between RGB and 4d Bayer

  

  Aaron Fargeon

  committed
  62dbe37

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• removed image-related functions

  

  Aaron Fargeon

  committed
  2d0455c

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• changed default noise period for PhaseContour

  

  Aaron Fargeon

  committed
  19e1804

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Commits on Jul 20, 2023

• added custom P and Q matrices

  

  Aaron Fargeon

  committed
  6a392b7

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• removed resize import

  

  Aaron Fargeon

  committed
  491cc3b

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• added .upper() to coded aperture methods

  

  Aaron Fargeon

  committed
  8e976ff

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• fixed assertions

  

  Aaron Fargeon

  committed
  e3454dc

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• single file simulation with custom masks (Tikhonov method included)

  

  Aaron Fargeon

  committed
  712990d

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• Edit docstrings.

  ebezzam

  committed
  6604f9c

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• Merge branch 'masks' of https://github.com/AF-55/LenslessPiCam into masks

  ebezzam

  committed
  f584b05

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• Clean up mask example script.

  ebezzam

  committed
  4ebc364

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• Update gitignore.

  ebezzam

  committed
  bf5d315

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• Fix comment.

  ebezzam

  committed
  074919d

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• Update comments.

  ebezzam

  committed
  4b466df

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Commits on Jul 21, 2023

• Fix settings for FZA.

  ebezzam

  committed
  8089c4f

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• changed default ADMM n_iter to 20

  

  Aaron Fargeon

  committed
  91fda9f

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• separated P & Q computation function

  

  Aaron Fargeon

  committed
  7ad591e

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• changed default ADMM iter to 20

  

  Aaron Fargeon

  committed
  36c6c8b

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• Merge branch 'masks' of https://github.com/AF-55/LenslessPiCam into masks

  

  Aaron Fargeon

  committed
  4e1606f

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Commits on Jul 25, 2023

• Changed default FZA radius

  

  Aaron Fargeon

  committed
  307ab49

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• Change file name

  

  Aaron Fargeon

  committed
  b6304bd

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• name change

  

  Aaron Fargeon

  committed
  66dad51

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• name change

  

  Aaron Fargeon

  committed
  a1c0318

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• Custom mask dataset simulation

  

  Aaron Fargeon

  committed
  c9e6aa5

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• fixed MLS issue, removed comments

  

  Aaron Fargeon

  committed
  b9e4acc

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• added reconstruction normalization

  

  Aaron Fargeon

  committed
  459b924

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Commits on Jul 26, 2023

• changed docstrings and config name

  

  Aaron Fargeon

  committed
  925a4b3

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• change default flatcam parameter to false

  

  Aaron Fargeon

  committed
  0f92ea6

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Commits on Jul 28, 2023

• Merge with main.

  ebezzam

  committed
  0f7c51e

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• Add line for formatting.

  ebezzam

  committed
  3622a9f

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• Add support for float-valued feature_size.

  ebezzam

  committed
  69a2e3a

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• Refactor.

  ebezzam

  committed
  847a426

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• Clean up mask simulation and tikhonov recon.

  ebezzam

  committed
  8a6e9bc

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• Formatting.

  ebezzam

  committed
  9582a5d

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• Formatting

  ebezzam

  committed
  e0b6752

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• Add docs for coded aperture reconstruction.

  ebezzam

  committed
  17f9b37

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Commits on Jul 31, 2023

• ILO single image simulation files

  

  Aaron Fargeon

  committed
  7601b87

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• added face alignment for ILO

  

  Aaron Fargeon

  committed
  e6178bd

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• minor changes

  

  Aaron Fargeon

  committed
  08e3b0c

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• minor changes (plots, docstring, etc)

  

  Aaron Fargeon

  committed
  498f2ce

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• minor changes (plots, docstring, etc)

  

  Aaron Fargeon

  committed
  71db09d

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• implemented tikhonov reconstruction

  

  Aaron Fargeon

  committed
  572e71a

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• Merge branch 'main' into masks

  ebezzam

  committed
  443719a

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• FIx mask parsing.

  ebezzam

  committed
  599aa1f

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• Inherit from single file config, add torch support

  ebezzam

  committed
  25eb4d8

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• Update changelog

  ebezzam

  committed
  dc2331b

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• Update changelog.

  ebezzam

  committed
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• Add punctuation.

  ebezzam

  committed
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Commits on Aug 2, 2023

• pull from masks

  

  Aaron Fargeon

  committed
  ad3eb2b

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• separated to avoid conflicts

  

  Aaron Fargeon

  committed
  4917a05

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• Merge branch 'LCAV:main' into ilo

  AF-55

  authored
  e41b2f4

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• adapted to modified mask class

  

  Aaron Fargeon

  committed
  8352bee

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• normalize psf

  

  Aaron Fargeon

  committed
  16b5dca

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• Merge branch 'masks' of https://github.com/AF-55/LenslessPiCam into ilo

  

  Aaron Fargeon

  committed
  7c424b5

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• minor fixes + plots

  

  Aaron Fargeon

  committed
  e3b1c84

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• minor fixes + plots

  

  Aaron Fargeon

  committed
  7f6d057

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• clean code to remove ticks

  

  Aaron Fargeon

  committed
  aac401c

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• Merge branch 'masks' of https://github.com/AF-55/LenslessPiCam into ilo

  

  Aaron Fargeon

  committed
  f28c9dd

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Commits on Aug 3, 2023

• Dirty dump of ILO reconstruction files.

  ebezzam

  committed
  2530987

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• refactor

  ebezzam

  committed
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Commits on Aug 8, 2023

• rearranging

  

  Aaron Fargeon

  committed
  d0ab93c

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• added numpy array PSF adaptation

  

  Aaron Fargeon

  committed
  028dd7b

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Commits on Aug 9, 2023

• adapter to remote server (/scratch/...)

  

  Aaron Fargeon

  committed
  a67ae1d

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• added dlib for ILO

  AF-55

  committed
  7074025

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Commits on Aug 15, 2023

• File to test LatentOptimizer import

  AF-55

  committed
  7815d17

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Commits on Aug 16, 2023

• Removed download, added predictor_path argument

  AF-55

  committed
  ec23cda

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• testing data imports

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• added proper environment for ILO

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• minor modifications

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• testing

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  4ec2f6c

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• Minor changes (align face)

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  69dd5e6

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• Changed forward model

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Commits on Aug 21, 2023

• Add face aligner download if needed.

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  21a7fab

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• Fix parsing of StyleGAN files.

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Commits on Aug 22, 2023

• Added Ninja

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  1d787f8

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• Changed paths and dirs

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• Removed lambda in forward model definition

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• New file for ILO dataset simulation

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  153bf10

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• started to adapt code to single file

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• Clean up file paths.

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• added psf argument

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• Fix forward model configuration.

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  63694c7

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• Use newer waveprop.

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• plotting ILO result

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  160c03f

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• Trying different hyperparameters.

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