fixed inconsistency in the readme

README.md

@@ -25,6 +25,8 @@ First clone and enter the `augur` repository:
 ```bash
 git clone [email protected]:LSSTDESC/augur.git
 cd augur
+# set the variable AUGUR_DIR to the current directory
+AUGUR_DIR=${PWD}
 ```
 
 ### Create a new conda environment
@@ -43,6 +45,16 @@ conda env update --name my_env --file=environment.yml --prune
 ```
 and activate your environment with `conda activate [my_env/forecasting]`.
 
+### Cosmosis setup
+Now we need to build the cosmosis standard library:
+```bash
+source ${CONDA_PREFIX}/bin/cosmosis-configure
+cd ${CONDA_PREFIX}
+cosmosis-build-standard-library
+# go back to the augur directory
+cd ${AUGUR_DIR}
+```
+
 ### Configure paths necessary for Augur
 We need to let augur know about the location of Firecrown, to do that, run the following command:
 ```bash
@@ -58,14 +70,6 @@ conda deactivate
 conda activate forecasting
 ```
 
-### Cosmosis setup
-Now we need to build the cosmosis standard library:
-```bash
-source ${CONDA_PREFIX}/bin/cosmosis-configure
-cd ${CONDA_PREFIX}
-cosmosis-build-standard-library
-```
-
 ### Finally install augur
 ```bash
 cd ${AUGUR_DIR}

environment.yml

@@ -10,4 +10,4 @@ dependencies:
   - numdifftools
   - numpydoc
   - qp-prob
-  - tjpcov
+  - tjpcov