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TCT_TGS
TCT_TGS PublicA pipeline for identifying transposable element (TE) chimeric transcripts (TCTs) in tumor cells using long-read RNA-seq. It includes read alignment, transcript assembly and annotation, reference tr…
Python
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TGS_somatic_TEI
TGS_somatic_TEI PublicThis pipeline is designed to identify and refine **somatic transposable element insertions (TEIs)** with high confidence. It integrates a series of tools and custom scripts to detect, correct, and …
Python
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