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add DOI badge and table with results
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cbouy authored May 23, 2022
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This repository benchmarks the ability of MDAnalysis' `RDKitConverter` to infer bond orders and charges from molecules with all hydrogens explicit.

To cite this repository, please use the following DOI:

[![DOI](https://zenodo.org/badge/471816709.svg)](https://zenodo.org/badge/latestdoi/471816709)

## Results

![current accuracy](https://img.shields.io/endpoint?url=https%3A%2F%2Fraw.githubusercontent.com%2FMDAnalysis%2FRDKitConverter-benchmark%2Fmain%2Fresults%2Fbadge.json)

Details on the benchmark can be found [here](results/results.json).
| Description | Value |
| --- | --- |
| **MDAnalysis version** | 2.2.0-dev0 |
| **Accuracy** | 99.14% |
| **Number of molecules fetched** | 2,136,187 |
| **Number of molecules processed** | 1,942,004 |
| **Number of molecules failed** | 16,615 |

Details on the benchmark can also be found [here](results/results.json).

The **interactive list of molecules** currently failing can be accessed [here](https://raw.githack.com/MDAnalysis/RDKitConverter-benchmark/main/results/failed_molecules.html) (click on a molecule's image to zoom in).

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