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force segdb update
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jithenece committed Jun 20, 2024
1 parent 42d9ec1 commit 7ec991b
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Showing 2 changed files with 1 addition and 2 deletions.
1 change: 0 additions & 1 deletion models/bamf_ct_liver_tumor/config/default.yml
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Expand Up @@ -25,7 +25,6 @@ modules:
nnunet_config: 3d_fullres
roi: SPLEEN,KIDNEY,GALLBLADDER,DUODENUM,PANCREAS,SMALL_INTESTINE,LUNG,LIVER,LIVER+TUMOR
export_prob_maps: False
folds: 0

DsegConverter:
model_name: bamf_ct_liver_tumor
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2 changes: 1 addition & 1 deletion models/bamf_ct_liver_tumor/dockerfiles/Dockerfile
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Expand Up @@ -11,7 +11,7 @@ ENV SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True
RUN pip3 install --no-cache-dir nnunetv2==2.0

# Install updated segdb entries
RUN pip uninstall segdb
RUN pip uninstall segdb -y
RUN pip install git+https://github.com/MHubAI/segdb.git

# Clone the main branch of MHubAI/models
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