36 ci

.github/workflows/bookdown-build-and-deploy.yml

@@ -0,0 +1,16 @@
+name: Déploiement de parcours_r_module6_publications_reproductibles 
+
+on:
+  push:
+    branches:
+      - main
+      - master
+
+  workflow_dispatch:
+
+jobs:
+  build-and-deploy-bookdown:
+    name: Build and bookdown
+    uses: MTES-MCT/parcours-r/.github/workflows/bookdown-build-from-desc-and-deploy.yml@master
+    with:
+      r_version: '4.4.1'

.github/workflows/bookdown-build.yml

@@ -0,0 +1,14 @@
+name: Test compilation de parcours_r_module6_publications_reproductibles
+
+on:
+  pull_request:
+    branches: [main, master, dev, dev-ci, 36-CI]
+
+  workflow_dispatch:
+
+jobs:
+  build-bookdown:
+    name: Build bookdown
+    uses: MTES-MCT/parcours-r/.github/workflows/bookdown-build-from-desc.yml@master
+    with:
+      r_version: '4.4.1'

.github/workflows/rstudio-image-build.yml

@@ -0,0 +1,31 @@
+name: Image docker parcours_r_module6_publications_reproductibles
+
+on:
+  push:
+    branches:
+      - main
+      - master
+      - dev
+      - 36-CI
+    paths:
+      - .github/workflows/rstudio-image-build.yml
+      - Dockerfile
+      - DESCRIPTION
+
+  pull_request:
+    types:
+      - created
+    branches:
+      - main
+      - master
+      - dev
+    paths:
+      - .github/workflows/rstudio-image-build.yml
+      - Dockerfile
+      - DESCRIPTION
+
+  workflow_dispatch:     
+
+jobs:
+  build-rstudio-image:
+    uses: MTES-MCT/parcours-r/.github/workflows/rstudio-image-build.yml@master

.gitignore

@@ -5,4 +5,5 @@
 _book
 _bookdown_files
 *.html
-support-documents-reproductibles.Rmd
+support-documents-reproductibles.Rmd
+archives_docs_compiles/

DESCRIPTION

@@ -0,0 +1,42 @@
+Type: Book
+Package: Parcours-R-M6
+Title: Parcours R M6 Publications Reproductibles avec RMarkdown
+Version: 0.1.0
+Description: Valise pédagogique pour le module 6 du parcours R : Publications Reproductibles avec RMarkdown
+License: MIT
+URL: https://github.com/MTES-MCT/parcours_r_module_publication_rmarkdown
+Encoding: UTF-8
+RoxygenNote: 7.2.3
+Imports: 
+    COVID19,
+    dplyr,
+    COGiter,
+    emo,
+    ggplot2,
+    gouvdown,
+    gouvdown.fonts,
+    glue,
+    htmltools,
+    kableExtra,
+    knitr,
+    lubridate,
+    metathis,
+    pagedown,
+    readr,
+    rmarkdown,
+    savoirfR,
+    scales,
+    showtext,
+    stringi,
+    tidyr,
+    tidyverse,
+    tinytex,
+    xaringan,
+    xaringanExtra,
+    xaringanthemer
+Remotes:
+    hadley/emo, 
+    MaelTheuliere/COGiter,
+    MTES-MCT/savoirfR,
+    spyrales/gouvdown,
+    spyrales/gouvdown.fonts

Dockerfile

@@ -0,0 +1,7 @@
+ARG R_VERSION=4.4.1
+
+FROM inseefrlab/onyxia-rstudio:r${R_VERSION}
+RUN apt-get update && apt-get install -y cargo
+RUN R -e "install.packages('remotes', repos = c(CRAN = 'https://cloud.r-project.org'))"
+COPY DESCRIPTION DESCRIPTION
+RUN R -e 'remotes::install_deps(dependencies = TRUE)'

_bookdown.yml

@@ -1,4 +1,4 @@
-book_filename: "support-documents-reproductibles"
+book_filename: "M6_Publications_reproductibles_avec_RMarkdown"
 delete_merged_file: TRUE
 language:
   ui: