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ensembl-genomio

Pipelines to turn basic genomic data into Ensembl cores and back

A set of ehive pipelines:

  • Genome dumper: dumps flat files from an Ensembl core database.
  • Genome loader: creates an Ensembl core database from a set of flat files.

The files are in various formats (fasta, gff3, json) following BRC4 specifications.

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