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Data for DRAGEN PRs #250

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@Just-Roma
Just-Roma authored Apr 25, 2023
commit 6fc2e46393e28e0cd834e7aacea6e83a3269c406
72 changes: 72 additions & 0 deletions data/modules/dragen/PR1915/AnW_30156_dragen.vc_hethom_ratio_metrics.csv
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VARIANT CALLER POSTFILTER,AnW_30156,1 Heterozygous,196970
VARIANT CALLER POSTFILTER,AnW_30156,1 Homozygous,151998
VARIANT CALLER POSTFILTER,AnW_30156,1 Het/Hom ratio,1.295
VARIANT CALLER POSTFILTER,AnW_30156,2 Heterozygous,149652
VARIANT CALLER POSTFILTER,AnW_30156,2 Homozygous,195752
VARIANT CALLER POSTFILTER,AnW_30156,2 Het/Hom ratio,0.764
VARIANT CALLER POSTFILTER,AnW_30156,3 Heterozygous,148596
VARIANT CALLER POSTFILTER,AnW_30156,3 Homozygous,100650
VARIANT CALLER POSTFILTER,AnW_30156,3 Het/Hom ratio,1.476
VARIANT CALLER POSTFILTER,AnW_30156,4 Heterozygous,151785
VARIANT CALLER POSTFILTER,AnW_30156,4 Homozygous,141626
VARIANT CALLER POSTFILTER,AnW_30156,4 Het/Hom ratio,1.071
VARIANT CALLER POSTFILTER,AnW_30156,5 Heterozygous,147685
VARIANT CALLER POSTFILTER,AnW_30156,5 Homozygous,144076
VARIANT CALLER POSTFILTER,AnW_30156,5 Het/Hom ratio,1.025
VARIANT CALLER POSTFILTER,AnW_30156,6 Heterozygous,120779
VARIANT CALLER POSTFILTER,AnW_30156,6 Homozygous,170649
VARIANT CALLER POSTFILTER,AnW_30156,6 Het/Hom ratio,0.707
VARIANT CALLER POSTFILTER,AnW_30156,7 Heterozygous,156096
VARIANT CALLER POSTFILTER,AnW_30156,7 Homozygous,130217
VARIANT CALLER POSTFILTER,AnW_30156,7 Het/Hom ratio,1.198
VARIANT CALLER POSTFILTER,AnW_30156,8 Heterozygous,167480
VARIANT CALLER POSTFILTER,AnW_30156,8 Homozygous,138030
VARIANT CALLER POSTFILTER,AnW_30156,8 Het/Hom ratio,1.213
VARIANT CALLER POSTFILTER,AnW_30156,9 Heterozygous,192101
VARIANT CALLER POSTFILTER,AnW_30156,9 Homozygous,185549
VARIANT CALLER POSTFILTER,AnW_30156,9 Het/Hom ratio,1.035
VARIANT CALLER POSTFILTER,AnW_30156,10 Heterozygous,121476
VARIANT CALLER POSTFILTER,AnW_30156,10 Homozygous,124495
VARIANT CALLER POSTFILTER,AnW_30156,10 Het/Hom ratio,0.975
VARIANT CALLER POSTFILTER,AnW_30156,11 Heterozygous,193031
VARIANT CALLER POSTFILTER,AnW_30156,11 Homozygous,161119
VARIANT CALLER POSTFILTER,AnW_30156,11 Het/Hom ratio,1.198
VARIANT CALLER POSTFILTER,AnW_30156,12 Heterozygous,105822
VARIANT CALLER POSTFILTER,AnW_30156,12 Homozygous,101704
VARIANT CALLER POSTFILTER,AnW_30156,12 Het/Hom ratio,1.040
VARIANT CALLER POSTFILTER,AnW_30156,13 Heterozygous,151722
VARIANT CALLER POSTFILTER,AnW_30156,13 Homozygous,129429
VARIANT CALLER POSTFILTER,AnW_30156,13 Het/Hom ratio,1.172
VARIANT CALLER POSTFILTER,AnW_30156,14 Heterozygous,189397
VARIANT CALLER POSTFILTER,AnW_30156,14 Homozygous,163758
VARIANT CALLER POSTFILTER,AnW_30156,14 Het/Hom ratio,1.156
VARIANT CALLER POSTFILTER,AnW_30156,15 Heterozygous,182651
VARIANT CALLER POSTFILTER,AnW_30156,15 Homozygous,165024
VARIANT CALLER POSTFILTER,AnW_30156,15 Het/Hom ratio,1.106
VARIANT CALLER POSTFILTER,AnW_30156,16 Heterozygous,103344
VARIANT CALLER POSTFILTER,AnW_30156,16 Homozygous,120828
VARIANT CALLER POSTFILTER,AnW_30156,16 Het/Hom ratio,0.855
VARIANT CALLER POSTFILTER,AnW_30156,17 Heterozygous,128400
VARIANT CALLER POSTFILTER,AnW_30156,17 Homozygous,119256
VARIANT CALLER POSTFILTER,AnW_30156,17 Het/Hom ratio,1.076
VARIANT CALLER POSTFILTER,AnW_30156,18 Heterozygous,112854
VARIANT CALLER POSTFILTER,AnW_30156,18 Homozygous,165562
VARIANT CALLER POSTFILTER,AnW_30156,18 Het/Hom ratio,0.681
VARIANT CALLER POSTFILTER,AnW_30156,19 Heterozygous,115493
VARIANT CALLER POSTFILTER,AnW_30156,19 Homozygous,169413
VARIANT CALLER POSTFILTER,AnW_30156,19 Het/Hom ratio,0.681
VARIANT CALLER POSTFILTER,AnW_30156,20 Heterozygous,160571
VARIANT CALLER POSTFILTER,AnW_30156,20 Homozygous,186513
VARIANT CALLER POSTFILTER,AnW_30156,20 Het/Hom ratio,0.860
VARIANT CALLER POSTFILTER,AnW_30156,21 Heterozygous,121928
VARIANT CALLER POSTFILTER,AnW_30156,21 Homozygous,131917
VARIANT CALLER POSTFILTER,AnW_30156,21 Het/Hom ratio,0.924
VARIANT CALLER POSTFILTER,AnW_30156,22 Heterozygous,130583
VARIANT CALLER POSTFILTER,AnW_30156,22 Homozygous,146406
VARIANT CALLER POSTFILTER,AnW_30156,22 Het/Hom ratio,0.891
VARIANT CALLER POSTFILTER,AnW_30156,X Heterozygous,154359
VARIANT CALLER POSTFILTER,AnW_30156,X Homozygous,181340
VARIANT CALLER POSTFILTER,AnW_30156,X Het/Hom ratio,0.851
VARIANT CALLER POSTFILTER,AnW_30156,Y Heterozygous,0
VARIANT CALLER POSTFILTER,AnW_30156,Y Homozygous,0
VARIANT CALLER POSTFILTER,AnW_30156,Y Het/Hom ratio,inf
432 changes: 432 additions & 0 deletions data/modules/dragen/PR1915/CWpn_4499_dragen.vc_hethom_ratio_metrics.csv
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288 changes: 288 additions & 0 deletions data/modules/dragen/PR1915/JqWe_9190_dragen.vc_hethom_ratio_metrics.csv
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72 changes: 72 additions & 0 deletions data/modules/dragen/PR1915/MICoHG_9054_dragen.vc_hethom_ratio_metrics.csv
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Original file line number Diff line number Diff line change
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VARIANT CALLER POSTFILTER,MICoHG_9054,1 Heterozygous,188629
VARIANT CALLER POSTFILTER,MICoHG_9054,1 Homozygous,177916
VARIANT CALLER POSTFILTER,MICoHG_9054,1 Het/Hom ratio,1.060
VARIANT CALLER POSTFILTER,MICoHG_9054,2 Heterozygous,132878
VARIANT CALLER POSTFILTER,MICoHG_9054,2 Homozygous,133798
VARIANT CALLER POSTFILTER,MICoHG_9054,2 Het/Hom ratio,0.993
VARIANT CALLER POSTFILTER,MICoHG_9054,3 Heterozygous,140143
VARIANT CALLER POSTFILTER,MICoHG_9054,3 Homozygous,106044
VARIANT CALLER POSTFILTER,MICoHG_9054,3 Het/Hom ratio,1.321
VARIANT CALLER POSTFILTER,MICoHG_9054,4 Heterozygous,127343
VARIANT CALLER POSTFILTER,MICoHG_9054,4 Homozygous,142925
VARIANT CALLER POSTFILTER,MICoHG_9054,4 Het/Hom ratio,0.890
VARIANT CALLER POSTFILTER,MICoHG_9054,5 Heterozygous,176758
VARIANT CALLER POSTFILTER,MICoHG_9054,5 Homozygous,170916
VARIANT CALLER POSTFILTER,MICoHG_9054,5 Het/Hom ratio,1.034
VARIANT CALLER POSTFILTER,MICoHG_9054,6 Heterozygous,133775
VARIANT CALLER POSTFILTER,MICoHG_9054,6 Homozygous,143177
VARIANT CALLER POSTFILTER,MICoHG_9054,6 Het/Hom ratio,0.934
VARIANT CALLER POSTFILTER,MICoHG_9054,7 Heterozygous,179624
VARIANT CALLER POSTFILTER,MICoHG_9054,7 Homozygous,143479
VARIANT CALLER POSTFILTER,MICoHG_9054,7 Het/Hom ratio,1.251
VARIANT CALLER POSTFILTER,MICoHG_9054,8 Heterozygous,157794
VARIANT CALLER POSTFILTER,MICoHG_9054,8 Homozygous,155944
VARIANT CALLER POSTFILTER,MICoHG_9054,8 Het/Hom ratio,1.011
VARIANT CALLER POSTFILTER,MICoHG_9054,9 Heterozygous,130489
VARIANT CALLER POSTFILTER,MICoHG_9054,9 Homozygous,135115
VARIANT CALLER POSTFILTER,MICoHG_9054,9 Het/Hom ratio,0.965
VARIANT CALLER POSTFILTER,MICoHG_9054,10 Heterozygous,109868
VARIANT CALLER POSTFILTER,MICoHG_9054,10 Homozygous,108878
VARIANT CALLER POSTFILTER,MICoHG_9054,10 Het/Hom ratio,1.009
VARIANT CALLER POSTFILTER,MICoHG_9054,11 Heterozygous,157481
VARIANT CALLER POSTFILTER,MICoHG_9054,11 Homozygous,154087
VARIANT CALLER POSTFILTER,MICoHG_9054,11 Het/Hom ratio,1.022
VARIANT CALLER POSTFILTER,MICoHG_9054,12 Heterozygous,160940
VARIANT CALLER POSTFILTER,MICoHG_9054,12 Homozygous,100398
VARIANT CALLER POSTFILTER,MICoHG_9054,12 Het/Hom ratio,1.603
VARIANT CALLER POSTFILTER,MICoHG_9054,13 Heterozygous,135645
VARIANT CALLER POSTFILTER,MICoHG_9054,13 Homozygous,199846
VARIANT CALLER POSTFILTER,MICoHG_9054,13 Het/Hom ratio,0.678
VARIANT CALLER POSTFILTER,MICoHG_9054,14 Heterozygous,151187
VARIANT CALLER POSTFILTER,MICoHG_9054,14 Homozygous,157791
VARIANT CALLER POSTFILTER,MICoHG_9054,14 Het/Hom ratio,0.958
VARIANT CALLER POSTFILTER,MICoHG_9054,15 Heterozygous,105546
VARIANT CALLER POSTFILTER,MICoHG_9054,15 Homozygous,166585
VARIANT CALLER POSTFILTER,MICoHG_9054,15 Het/Hom ratio,0.633
VARIANT CALLER POSTFILTER,MICoHG_9054,16 Heterozygous,197559
VARIANT CALLER POSTFILTER,MICoHG_9054,16 Homozygous,191918
VARIANT CALLER POSTFILTER,MICoHG_9054,16 Het/Hom ratio,1.029
VARIANT CALLER POSTFILTER,MICoHG_9054,17 Heterozygous,163638
VARIANT CALLER POSTFILTER,MICoHG_9054,17 Homozygous,197339
VARIANT CALLER POSTFILTER,MICoHG_9054,17 Het/Hom ratio,0.829
VARIANT CALLER POSTFILTER,MICoHG_9054,18 Heterozygous,189167
VARIANT CALLER POSTFILTER,MICoHG_9054,18 Homozygous,169006
VARIANT CALLER POSTFILTER,MICoHG_9054,18 Het/Hom ratio,1.119
VARIANT CALLER POSTFILTER,MICoHG_9054,19 Heterozygous,160975
VARIANT CALLER POSTFILTER,MICoHG_9054,19 Homozygous,102263
VARIANT CALLER POSTFILTER,MICoHG_9054,19 Het/Hom ratio,1.574
VARIANT CALLER POSTFILTER,MICoHG_9054,20 Heterozygous,134625
VARIANT CALLER POSTFILTER,MICoHG_9054,20 Homozygous,176298
VARIANT CALLER POSTFILTER,MICoHG_9054,20 Het/Hom ratio,0.763
VARIANT CALLER POSTFILTER,MICoHG_9054,21 Heterozygous,148426
VARIANT CALLER POSTFILTER,MICoHG_9054,21 Homozygous,144962
VARIANT CALLER POSTFILTER,MICoHG_9054,21 Het/Hom ratio,1.023
VARIANT CALLER POSTFILTER,MICoHG_9054,22 Heterozygous,195775
VARIANT CALLER POSTFILTER,MICoHG_9054,22 Homozygous,188932
VARIANT CALLER POSTFILTER,MICoHG_9054,22 Het/Hom ratio,1.036
VARIANT CALLER POSTFILTER,MICoHG_9054,X Heterozygous,121742
VARIANT CALLER POSTFILTER,MICoHG_9054,X Homozygous,128450
VARIANT CALLER POSTFILTER,MICoHG_9054,X Het/Hom ratio,0.947
VARIANT CALLER POSTFILTER,MICoHG_9054,Y Heterozygous,131616
VARIANT CALLER POSTFILTER,MICoHG_9054,Y Homozygous,103908
VARIANT CALLER POSTFILTER,MICoHG_9054,Y Het/Hom ratio,1.266
72 changes: 72 additions & 0 deletions data/modules/dragen/PR1915/PtX_9299_dragen.vc_hethom_ratio_metrics.csv
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Original file line number Diff line number Diff line change
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VARIANT CALLER POSTFILTER,PtX_9299,1 Heterozygous,185040
VARIANT CALLER POSTFILTER,PtX_9299,1 Homozygous,178867
VARIANT CALLER POSTFILTER,PtX_9299,1 Het/Hom ratio,1.034
VARIANT CALLER POSTFILTER,PtX_9299,2 Heterozygous,108602
VARIANT CALLER POSTFILTER,PtX_9299,2 Homozygous,165145
VARIANT CALLER POSTFILTER,PtX_9299,2 Het/Hom ratio,0.657
VARIANT CALLER POSTFILTER,PtX_9299,3 Heterozygous,151105
VARIANT CALLER POSTFILTER,PtX_9299,3 Homozygous,156647
VARIANT CALLER POSTFILTER,PtX_9299,3 Het/Hom ratio,0.964
VARIANT CALLER POSTFILTER,PtX_9299,4 Heterozygous,104362
VARIANT CALLER POSTFILTER,PtX_9299,4 Homozygous,152233
VARIANT CALLER POSTFILTER,PtX_9299,4 Het/Hom ratio,0.685
VARIANT CALLER POSTFILTER,PtX_9299,5 Heterozygous,135844
VARIANT CALLER POSTFILTER,PtX_9299,5 Homozygous,197179
VARIANT CALLER POSTFILTER,PtX_9299,5 Het/Hom ratio,0.688
VARIANT CALLER POSTFILTER,PtX_9299,6 Heterozygous,117068
VARIANT CALLER POSTFILTER,PtX_9299,6 Homozygous,198880
VARIANT CALLER POSTFILTER,PtX_9299,6 Het/Hom ratio,0.588
VARIANT CALLER POSTFILTER,PtX_9299,7 Heterozygous,118652
VARIANT CALLER POSTFILTER,PtX_9299,7 Homozygous,191030
VARIANT CALLER POSTFILTER,PtX_9299,7 Het/Hom ratio,0.621
VARIANT CALLER POSTFILTER,PtX_9299,8 Heterozygous,124694
VARIANT CALLER POSTFILTER,PtX_9299,8 Homozygous,167640
VARIANT CALLER POSTFILTER,PtX_9299,8 Het/Hom ratio,0.743
VARIANT CALLER POSTFILTER,PtX_9299,9 Heterozygous,193915
VARIANT CALLER POSTFILTER,PtX_9299,9 Homozygous,121576
VARIANT CALLER POSTFILTER,PtX_9299,9 Het/Hom ratio,1.595
VARIANT CALLER POSTFILTER,PtX_9299,10 Heterozygous,153845
VARIANT CALLER POSTFILTER,PtX_9299,10 Homozygous,157219
VARIANT CALLER POSTFILTER,PtX_9299,10 Het/Hom ratio,0.978
VARIANT CALLER POSTFILTER,PtX_9299,11 Heterozygous,145515
VARIANT CALLER POSTFILTER,PtX_9299,11 Homozygous,144117
VARIANT CALLER POSTFILTER,PtX_9299,11 Het/Hom ratio,1.009
VARIANT CALLER POSTFILTER,PtX_9299,12 Heterozygous,100895
VARIANT CALLER POSTFILTER,PtX_9299,12 Homozygous,171826
VARIANT CALLER POSTFILTER,PtX_9299,12 Het/Hom ratio,0.587
VARIANT CALLER POSTFILTER,PtX_9299,13 Heterozygous,109999
VARIANT CALLER POSTFILTER,PtX_9299,13 Homozygous,137978
VARIANT CALLER POSTFILTER,PtX_9299,13 Het/Hom ratio,0.797
VARIANT CALLER POSTFILTER,PtX_9299,14 Heterozygous,142762
VARIANT CALLER POSTFILTER,PtX_9299,14 Homozygous,150524
VARIANT CALLER POSTFILTER,PtX_9299,14 Het/Hom ratio,0.948
VARIANT CALLER POSTFILTER,PtX_9299,15 Heterozygous,152260
VARIANT CALLER POSTFILTER,PtX_9299,15 Homozygous,104686
VARIANT CALLER POSTFILTER,PtX_9299,15 Het/Hom ratio,1.454
VARIANT CALLER POSTFILTER,PtX_9299,16 Heterozygous,195609
VARIANT CALLER POSTFILTER,PtX_9299,16 Homozygous,150172
VARIANT CALLER POSTFILTER,PtX_9299,16 Het/Hom ratio,1.302
VARIANT CALLER POSTFILTER,PtX_9299,17 Heterozygous,147632
VARIANT CALLER POSTFILTER,PtX_9299,17 Homozygous,185783
VARIANT CALLER POSTFILTER,PtX_9299,17 Het/Hom ratio,0.794
VARIANT CALLER POSTFILTER,PtX_9299,18 Heterozygous,156683
VARIANT CALLER POSTFILTER,PtX_9299,18 Homozygous,103799
VARIANT CALLER POSTFILTER,PtX_9299,18 Het/Hom ratio,1.509
VARIANT CALLER POSTFILTER,PtX_9299,19 Heterozygous,162410
VARIANT CALLER POSTFILTER,PtX_9299,19 Homozygous,155721
VARIANT CALLER POSTFILTER,PtX_9299,19 Het/Hom ratio,1.042
VARIANT CALLER POSTFILTER,PtX_9299,20 Heterozygous,196344
VARIANT CALLER POSTFILTER,PtX_9299,20 Homozygous,127102
VARIANT CALLER POSTFILTER,PtX_9299,20 Het/Hom ratio,1.544
VARIANT CALLER POSTFILTER,PtX_9299,21 Heterozygous,173711
VARIANT CALLER POSTFILTER,PtX_9299,21 Homozygous,123348
VARIANT CALLER POSTFILTER,PtX_9299,21 Het/Hom ratio,1.408
VARIANT CALLER POSTFILTER,PtX_9299,22 Heterozygous,112960
VARIANT CALLER POSTFILTER,PtX_9299,22 Homozygous,133713
VARIANT CALLER POSTFILTER,PtX_9299,22 Het/Hom ratio,0.844
VARIANT CALLER POSTFILTER,PtX_9299,X Heterozygous,173653
VARIANT CALLER POSTFILTER,PtX_9299,X Homozygous,162244
VARIANT CALLER POSTFILTER,PtX_9299,X Het/Hom ratio,1.070
VARIANT CALLER POSTFILTER,PtX_9299,Y Heterozygous,173577
VARIANT CALLER POSTFILTER,PtX_9299,Y Homozygous,195061
VARIANT CALLER POSTFILTER,PtX_9299,Y Het/Hom ratio,0.889
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