Fixing links from #134 (#135)

NCAR · Oct 26, 2024 · 36a04e4 · 36a04e4
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diff --git a/applications/applications.rst b/applications/applications.rst
@@ -15,7 +15,7 @@ Python resources by category with relevant context and links to additional resou
 
             .. card:: Time
 
-                - `Dates and times <applications/datetime.ipynb>`_
+                - `Dates and times <datetime.ipynb>`__
 
     .. grid-item::
 
@@ -24,8 +24,8 @@ Python resources by category with relevant context and links to additional resou
 
             .. card:: Math
 
-                - `General applied math <applications/general_applied_math.ipynb>`_
-                - `Spectral analysis <applications/spectral_analysis.ipynb>`_
+                - `General applied math <general_applied_math.ipynb>`__
+                - `Spectral analysis <spectral_analysis.ipynb>`__
 
     .. grid-item::
 
@@ -34,5 +34,5 @@ Python resources by category with relevant context and links to additional resou
 
             .. card:: Geoscience
 
-                - `Climatology <applications/climatology.ipynb>`_
-                - `Humid heat metrics <applications/humid_heat_metrics.ipynb>`_
+                - `Climatology <climatology.ipynb>`_
+                - `Humid heat metrics <humid_heat_metrics.ipynb>`__
diff --git a/index.rst b/index.rst
@@ -33,8 +33,37 @@ New to Python or GeoCAT Applications? Check out the `Getting Started <GETTING_ST
 Python Applications
 -------------------
 
-.. include:: applications/applications.rst
-    :start-line: 5
+.. grid:: 3
+    :gutter: 2
+
+    .. grid-item::
+
+        .. grid:: 1
+            :gutter: 1
+
+            .. card:: Time
+
+                - `Dates and times <./applications/datetime.ipynb>`__
+
+    .. grid-item::
+
+        .. grid:: 1
+            :gutter: 1
+
+            .. card:: Math
+
+                - `General applied math <./applications/general_applied_math.ipynb>`__
+                - `Spectral analysis <./applications/spectral_analysis.ipynb>`__
+
+    .. grid-item::
+
+        .. grid:: 1
+            :gutter: 1
+
+            .. card:: Geoscience
+
+                - `Climatology <./applications/climatology.ipynb>`_
+                - `Humid heat metrics <./applications/humid_heat_metrics.ipynb>`__
 
 .. TIP::
     If you're looking for NCL to Python examples, please visit :ref:`ncl_applications`.

diff --git a/ncl/ncl_entries/spectral_analysis.ipynb b/ncl/ncl_entries/spectral_analysis.ipynb
@@ -19,7 +19,7 @@
     "\n",
     "For more examples of use, look at [NCL spectral analysis applications](https://www.ncl.ucar.edu/Applications/spec.shtml).\n",
     "\n",
-    "To see a concise example using Python, visit the [spectral_analysis](`../../applications/data_analysis/spectral_analysis.ipynb`) notebook."
+    "To see a concise example using Python, visit the [spectral_analysis](../../applications/spectral_analysis.ipynb) notebook."
    ]
   },
   {
@@ -508,13 +508,6 @@
     "    'Darwin and Tahiti Sea Level Pressure (SLP) Anomalies (1935-1998) - Power Spectral Density'\n",
     ");"
    ]
-  },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "Curious about how to more closely replicate the NCL version of spectral analysis? Check out our ['NCL Spectral Analysis Notebook']('../../ncl/NCL_spectral_analysis.ipynb')"
-   ]
   }
  ],
  "metadata": {

diff --git a/ncl/ncl_index/ncl-index-table.csv b/ncl/ncl_index/ncl-index-table.csv
@@ -1,23 +1,23 @@
 NCL Function,Description,Python Equivalent,Notes
-`sin <https://www.ncl.ucar.edu/Document/Functions/Built-in/sin.shtml>`__,"Computes the sine of numeric types","``math.sin()`` or ``numpy.sin()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#sin>`__
-`cos <https://www.ncl.ucar.edu/Document/Functions/Built-in/cos.shtml>`__,"Computes the cosine of numeric types","``math.cos()`` or ``numpy.cos()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#cos>`__
-`tan <https://www.ncl.ucar.edu/Document/Functions/Built-in/tan.shtml>`__,"Computes the tangent of numeric types","``math.tan()`` or ``numpy.tan()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#tan>`__
-`asin <https://www.ncl.ucar.edu/Document/Functions/Built-in/asin.shtml>`__,"Computes the inverse sine of numeric types","``math.asin()`` or ``numpy.arcsin()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#asin>`__
-`acos <https://www.ncl.ucar.edu/Document/Functions/Built-in/acos.shtml>`__,"Computes the inverse cosine of numeric types","``math.acos()`` or ``numpy.arccos()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#acos>`__
-`atan <https://www.ncl.ucar.edu/Document/Functions/Built-in/atan.shtml>`__,"Computes the inverse cosine of numeric types","``math.atan()`` or ``numpy.arctan()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#atan>`__
-`atan2 <https://www.ncl.ucar.edu/Document/Functions/Built-in/atan2.shtml>`__,"Computes the inverse tangent of (y/x) for numeric types","``math.atan2()`` or ``numpy.arctan2()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#atan2>`__
-`cosh <https://www.ncl.ucar.edu/Document/Functions/Built-in/cosh.shtml>`__,"Computes the hyperbolic cosine of numeric types","``math.cosh()`` or ``numpy.cosh()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#cosh>`__
-`sinh <https://www.ncl.ucar.edu/Document/Functions/Built-in/sinh.shtml>`__,"Computes the hyperbolic sine of numeric types","``math.sinh()`` or ``numpy.sinh()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#sinh>`__
-`tanh <https://www.ncl.ucar.edu/Document/Functions/Built-in/tanh.shtml>`__,"Computes the hyperbolic tangent of numeric types","``math.tanh()`` or ``numpy.tanh()``",`example notebook <../ncl_entries/trigonometric_functions.ipynb#tanh>`__
-`days_in_month <https://www.ncl.ucar.edu/Document/Functions/Built-in/days_in_month.shtml>`__,"Calculates the number of days in a month given month and year","``cftime.datetime()``",`example notebook <../ncl_entries/days_in_month.ipynb>`__
-`day_of_week <https://www.ncl.ucar.edu/Document/Functions/Built-in/day_of_week.shtml>`__,"Calculates the day of the week given month, day, and year","``cftime.datetime()``",`example notebook <../ncl_entries/day_of_week.ipynb>`__
-`calcDayAnomTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/calcDayAnomTLL.shtml>`__,"Calculates daily anomalies from a daily data climatology","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#calcdayanomtll>`__
-`calcMonAnomTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/calcMonAnomTLL.shtml>`__,"Calculates monthly anomalies by subtracting the long-term mean from each point","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#calcmonanomtll>`__
-`clmDayTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/clmDayTLL.shtml>`__,"Calculates long-term daily means (daily climatology) from daily data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#clmdaytll>`__
-`clmMonTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/clmMonTLL.shtml>`__,"Calculates long-term monthly means (monthly climatology) from monthly data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#clmmontll>`__
-`month_to_season <https://www.ncl.ucar.edu/Document/Functions/Contributed/month_to_season.shtml>`__,"Computes a user-specified three-month seasonal mean","``geocat.comp.month_to_season()``",`example notebook <../ncl_entries/climatology_functions.ipynb#month-to-season>`__
-`rmMonAnnCycTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/rmMonAnnCycTLL.shtml>`__,"Removes the annual cycle from monthly data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#rmmonanncyctll>`__
-`stdMonTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/stdMonTLL.shtml>`__,"Calculates standard deviations of monthly means","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology_functions.ipynb#stdmontll>`__
+`sin <https://www.ncl.ucar.edu/Document/Functions/Built-in/sin.shtml>`__,"Computes the sine of numeric types","``math.sin()`` or ``numpy.sin()``",`example notebook <../ncl_entries/trigonometry.ipynb#sin>`__
+`cos <https://www.ncl.ucar.edu/Document/Functions/Built-in/cos.shtml>`__,"Computes the cosine of numeric types","``math.cos()`` or ``numpy.cos()``",`example notebook <../ncl_entries/trigonometry.ipynb#cos>`__
+`tan <https://www.ncl.ucar.edu/Document/Functions/Built-in/tan.shtml>`__,"Computes the tangent of numeric types","``math.tan()`` or ``numpy.tan()``",`example notebook <../ncl_entries/trigonometry.ipynb#tan>`__
+`asin <https://www.ncl.ucar.edu/Document/Functions/Built-in/asin.shtml>`__,"Computes the inverse sine of numeric types","``math.asin()`` or ``numpy.arcsin()``",`example notebook <../ncl_entries/trigonometry.ipynb#asin>`__
+`acos <https://www.ncl.ucar.edu/Document/Functions/Built-in/acos.shtml>`__,"Computes the inverse cosine of numeric types","``math.acos()`` or ``numpy.arccos()``",`example notebook <../ncl_entries/trigonometry.ipynb#acos>`__
+`atan <https://www.ncl.ucar.edu/Document/Functions/Built-in/atan.shtml>`__,"Computes the inverse cosine of numeric types","``math.atan()`` or ``numpy.arctan()``",`example notebook <../ncl_entries/trigonometry.ipynb#atan>`__
+`atan2 <https://www.ncl.ucar.edu/Document/Functions/Built-in/atan2.shtml>`__,"Computes the inverse tangent of (y/x) for numeric types","``math.atan2()`` or ``numpy.arctan2()``",`example notebook <../ncl_entries/trigonometry.ipynb#atan2>`__
+`cosh <https://www.ncl.ucar.edu/Document/Functions/Built-in/cosh.shtml>`__,"Computes the hyperbolic cosine of numeric types","``math.cosh()`` or ``numpy.cosh()``",`example notebook <../ncl_entries/trigonometry.ipynb#cosh>`__
+`sinh <https://www.ncl.ucar.edu/Document/Functions/Built-in/sinh.shtml>`__,"Computes the hyperbolic sine of numeric types","``math.sinh()`` or ``numpy.sinh()``",`example notebook <../ncl_entries/trigonometry.ipynb#sinh>`__
+`tanh <https://www.ncl.ucar.edu/Document/Functions/Built-in/tanh.shtml>`__,"Computes the hyperbolic tangent of numeric types","``math.tanh()`` or ``numpy.tanh()``",`example notebook <../ncl_entries/trigonometry.ipynb#tanh>`__
+`days_in_month <https://www.ncl.ucar.edu/Document/Functions/Built-in/days_in_month.shtml>`__,"Calculates the number of days in a month given month and year","``cftime.datetime()``",`example notebook <../ncl_entries/time.ipynb#days-in-month>`__
+`day_of_week <https://www.ncl.ucar.edu/Document/Functions/Built-in/day_of_week.shtml>`__,"Calculates the day of the week given month, day, and year","``cftime.datetime()``",`example notebook <../ncl_entries/time.ipynb#day-of-week>`__
+`calcDayAnomTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/calcDayAnomTLL.shtml>`__,"Calculates daily anomalies from a daily data climatology","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#calcdayanomtll>`__
+`calcMonAnomTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/calcMonAnomTLL.shtml>`__,"Calculates monthly anomalies by subtracting the long-term mean from each point","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#calcmonanomtll>`__
+`clmDayTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/clmDayTLL.shtml>`__,"Calculates long-term daily means (daily climatology) from daily data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#clmdaytll>`__
+`clmMonTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/clmMonTLL.shtml>`__,"Calculates long-term monthly means (monthly climatology) from monthly data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#clmmontll>`__
+`month_to_season <https://www.ncl.ucar.edu/Document/Functions/Contributed/month_to_season.shtml>`__,"Computes a user-specified three-month seasonal mean","``geocat.comp.month_to_season()``",`example notebook <../ncl_entries/climatology.ipynb#month-to-season>`__
+`rmMonAnnCycTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/rmMonAnnCycTLL.shtml>`__,"Removes the annual cycle from monthly data","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#rmmonanncyctll>`__
+`stdMonTLL <https://www.ncl.ucar.edu/Document/Functions/Contributed/stdMonTLL.shtml>`__,"Calculates standard deviations of monthly means","``xarray.DataArray.groupby()``",`example notebook <../ncl_entries/climatology.ipynb#stdmontll>`__
 `abs <https://www.ncl.ucar.edu/Document/Functions/Built-in/abs.shtml>`__,"Returns the absolute value of numeric data","``abs()`` or ``numpy.abs()``",`example notebook <../ncl_entries/general_applied_math.ipynb#abs-fabs>`__
 `avg <https://www.ncl.ucar.edu/Document/Functions/Built-in/avg.shtml>`__,"Computes the average of a variable regardless of dimensionality","``numpy.average()`` or ``numpy.mean()``",`example notebook <../ncl_entries/general_applied_math.ipynb#avg>`__
 `cumsum <https://www.ncl.ucar.edu/Document/Functions/Built-in/cumsum.shtml>`__,"Calculates the cumulative sum","``numpy.cumsum()``",`example notebook <../ncl_entries/general_applied_math.ipynb#cumsum>`__
@@ -30,8 +30,8 @@ NCL Function,Description,Python Equivalent,Notes
 `mod <https://www.ncl.ucar.edu/Document/Functions/Contributed/mod.shtml>`__,"Remainder function which emulates the Fortran 'mod' intrinsic function","``%`` or ``numpy.mod()``",`example notebook <../ncl_entries/general_applied_math.ipynb#mod>`__
 `product <https://www.ncl.ucar.edu/Document/Functions/Built-in/product.shtml>`__,"Computes the product of the input","``math.prod()`` or ``numpy.prod()``",`example notebook <../ncl_entries/general_applied_math.ipynb#product>`__
 `sum <https://www.ncl.ucar.edu/Document/Functions/Built-in/sum.shtml>`__,"Sums the input","``sum()`` or ``numpy.sum()``",`example notebook <../ncl_entries/general_applied_math.ipynb#sum>`__
-`specx_anal <https://www.ncl.ucar.edu/Document/Functions/Built-in/specx_anal.shtml>`__," Calculates the spectra of a series.","``scipy.signal.periodogram()``, ``scipy.signal.convolve()``",`example notebook <../ncl_entries/specx_specxy_anal.ipynb>`__
-`specxy_anal <https://www.ncl.ucar.edu/Document/Functions/Built-in/specxy_anal.shtml>`__," Calculates the cross-spectra quantities of a series.","``scipy.signal.periodogram()``, ``scipy.signal.convolve()``, ``scipy.signal.csd()``, ``scipy.signal.coherence()``",`example notebook <../ncl_entries/specx_specxy_anal.ipynb>`__
+`specx_anal <https://www.ncl.ucar.edu/Document/Functions/Built-in/specx_anal.shtml>`__," Calculates the spectra of a series.","``scipy.signal.periodogram()``, ``scipy.signal.convolve()``",`example notebook <../ncl_entries/spectral_analysis.ipynb>`__
+`specxy_anal <https://www.ncl.ucar.edu/Document/Functions/Built-in/specxy_anal.shtml>`__," Calculates the cross-spectra quantities of a series.","``scipy.signal.periodogram()``, ``scipy.signal.convolve()``, ``scipy.signal.csd()``, ``scipy.signal.coherence()``",`example notebook <../ncl_entries/spectral_analysis.ipynb>`__
 `exp <https://www.ncl.ucar.edu/Document/Functions/Built-in/exp.shtml>`__,"Computes the value of e (the base of natural logarithms) raised to the power of the input","``math.exp()`` or ``numpy.exp()``",`example notebook <../ncl_entries/general_applied_math.ipynb#exp>`__
 `fabs <https://www.ncl.ucar.edu/Document/Functions/Built-in/fabs.shtml>`__,"Returns the absolute value of numeric data","``abs()`` or ``numpy.abs()``",`example notebook <../ncl_entries/general_applied_math.ipynb#abs-fabs>`__
 `max <https://www.ncl.ucar.edu/Document/Functions/Built-in/max.shtml>`__,"Computes the maximum value of a multi-dimensional array","``max()`` or ``numpy.max()``",`example notebook <../ncl_entries/general_applied_math.ipynb#max>`__