Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merge all recent develop changes into main #434

Merged
merged 26 commits into from
Oct 13, 2023
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
26 commits
Select commit Hold shift + click to select a range
393a255
Update README.md
ryma2fhir Sep 29, 2023
93914ad
Update README.md
ryma2fhir Sep 29, 2023
9548878
changed action to point to main QCChecker
ryma2fhir Oct 2, 2023
d903500
removed old actions that are not used anymore
ryma2fhir Oct 4, 2023
1d10483
Merge pull request #428 from NHSDigital/update/QCChecker
ryma2fhir Oct 4, 2023
9f2f05f
Merge branch 'develop' into ryma2fhir-patch-1
ryma2fhir Oct 4, 2023
b1bce08
Merge pull request #427 from NHSDigital/ryma2fhir-patch-1
ryma2fhir Oct 4, 2023
46765a6
Merge branch 'develop' into remove/actions
APageNHS Oct 5, 2023
ded227c
IOPS-2159 Inactivate PrimaryCare
APageNHS Oct 6, 2023
faeb98c
IOPS-2159 Fix property element
APageNHS Oct 6, 2023
b0bcbf8
IOPS-2173 Add SMS
APageNHS Oct 9, 2023
a193286
fixed some obvious spelling mistakes, and changed some file names
APageNHS Oct 10, 2023
4cac7dc
Updated description with details on potential source
APageNHS Oct 11, 2023
71887b8
Merge pull request #429 from NHSDigital/remove/actions
ryma2fhir Oct 12, 2023
1c743e9
Merge branch 'develop' into DigiMeds/DeprecatePrimaryCare
APageNHS Oct 12, 2023
98e937b
Merge pull request #430 from NHSDigital/DigiMeds/DeprecatePrimaryCare
APageNHS Oct 12, 2023
7f11ca3
Merge branch 'develop' into iops/AddSMS
APageNHS Oct 12, 2023
352e283
Merge pull request #431 from NHSDigital/iops/AddSMS
ryma2fhir Oct 12, 2023
1f79e00
Merge branch 'develop' into fix/ObviousSpellingMistakes
APageNHS Oct 13, 2023
920be61
ODS changes for time/dperiod extensions
APageNHS Oct 13, 2023
0ed119d
Merge pull request #432 from NHSDigital/fix/ObviousSpellingMistakes
APageNHS Oct 13, 2023
f584065
Merge branch 'develop' into ODS/ExtensionChanges
APageNHS Oct 13, 2023
2d4c01a
Updated purpose wording inline with Sprint 6 extensions
APageNHS Oct 13, 2023
0baf124
Merge branch 'ODS/ExtensionChanges' of https://github.com/NHSDigital/…
APageNHS Oct 13, 2023
e239700
Merge pull request #433 from NHSDigital/ODS/ExtensionChanges
APageNHS Oct 13, 2023
ae6986c
Merge branch 'main' into develop
APageNHS Oct 13, 2023
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion .github/workflows/QualityControlChecker.yml
Original file line number Diff line number Diff line change
Expand Up @@ -14,4 +14,4 @@ on:
jobs:
# This workflow contains a single job called "call-workflow" which references the FHIR validator repo
call-workflow:
uses: NHSDigital/IOPS-FHIR-Test-Scripts/.github/workflows/QualityControlCheckerUKCore.yml@main
uses: NHSDigital/IOPS-FHIR-Test-Scripts/.github/workflows/QualityControlChecker.yml@main
54 changes: 0 additions & 54 deletions .github/workflows/main.yml

This file was deleted.

96 changes: 0 additions & 96 deletions .github/workflows/validation-no-terminology.yml

This file was deleted.

1 change: 1 addition & 0 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,5 @@
# FHIR-R4-UKCORE-STAGING-MAIN
This repository is maintained by [Interoperability Team]( https://nhsd-confluence.digital.nhs.uk/pages/viewpage.action?spaceKey=IOPS&title=Interoperability+Standards) Any queries contact us via [email]( [email protected]).

UK Core Repository of FHIR Assets for HL7 FHIR® UK Core Implementation Guide [Simplifier project](https://simplifier.net/hl7fhirukcorer4).

Expand Down
9 changes: 7 additions & 2 deletions codesystems/CodeSystem-UKCore-DateTimeType.xml
Original file line number Diff line number Diff line change
@@ -1,11 +1,11 @@
<CodeSystem xmlns="http://hl7.org/fhir">
<id value="UKCore-DateTimeType"/>
<url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-DateTimeType"/>
<version value="2.0.0"/>
<version value="2.1.0"/>
<name value="UKCoreDateTimeType"/>
<title value="UK Core Date Time Type"/>
<status value="draft" />
<date value="2021-09-10" />
<date value="2023-10-13" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
Expand Down Expand Up @@ -85,4 +85,9 @@
<display value="Clock Stop Date Time"/>
<definition value="The date/time that the first response arrived at the incident location that counts as the arrival time based on the National Ambulance Quality Indicator definitions"/>
</concept>
<concept>
<code value="last-changed-date"/>
<display value="Last Changed Date"/>
<definition value="The date/time that the data was last changed"/>
</concept>
</CodeSystem>
Original file line number Diff line number Diff line change
Expand Up @@ -46,7 +46,7 @@
</concept>
<concept>
<code value="07" />
<display value="Formally detained under Mental Health Act Section 35 (Remand to hospital for report on accuseds mental condition)" />
<display value="Formally detained under Mental Health Act Section 35 (Remand to hospital for report on accused's mental condition)" />
</concept>
<concept>
<code value="08" />
Expand Down
66 changes: 35 additions & 31 deletions codesystems/CodeSystem-UKCore-MedicationRequestCategory.xml
Original file line number Diff line number Diff line change
@@ -1,34 +1,38 @@
<?xml version="1.0" encoding="UTF-8"?>
<CodeSystem xmlns="http://hl7.org/fhir">
<id value="UKCore-MedicationRequestCategory"/>
<url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-MedicationRequestCategory"/>
<version value="1.1.0" />
<name value="UKCoreMedicationRequestCategory"/>
<title value="UK Core Medication Request Category"/>
<status value="active" />
<date value="2022-12-16" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="[email protected]" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="A set of codes to define additional category concepts for a medication request."/>
<copyright value="Copyright &#169; 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an &quot;AS IS&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7&#174; FHIR&#174; standard Copyright &#169; 2011+ HL7 The HL7&#174; FHIR&#174; standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." />
<caseSensitive value="true"/>
<content value="complete"/>
<concept>
<code value="leave"/>
<display value="Leave"/>
<definition value="Requests for medications that the patient will take away with him/her during any short break from inpatient care. Typically requests would be dispensed by the hospital pharmacy to be self-administered at home with or without the assistance of community based nursing staff."/>
</concept>
<concept>
<code value="primarycare"/>
<display value="Primary Care"/>
<definition value="Requests for medications originating in a primary care setting. Typically requests would be dispensed by the patients nominated pharmacy to be self-administered at home with or without the assistance of community based nursing staff."/>
</concept>
<id value="UKCore-MedicationRequestCategory"/>
<url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-MedicationRequestCategory"/>
<version value="1.1.1"/>
<name value="UKCoreMedicationRequestCategory"/>
<title value="UK Core Medication Request Category"/>
<status value="active"/>
<date value="2023-10-06"/>
<publisher value="HL7 UK"/>
<contact>
<name value="HL7 UK"/>
<telecom>
<system value="email"/>
<value value="[email protected]"/>
<use value="work"/>
<rank value="1"/>
</telecom>
</contact>
<description value="A set of codes to define additional category concepts for a medication request."/>
<copyright value="Copyright &#169; 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an &quot;AS IS&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7&#174; FHIR&#174; standard Copyright &#169; 2011+ HL7 The HL7&#174; FHIR&#174; standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html."/>
<caseSensitive value="true"/>
<content value="complete"/>
<concept>
<code value="leave"/>
<display value="Leave"/>
<definition value="Requests for medications that the patient will take away with him/her during any short break from inpatient care. Typically requests would be dispensed by the hospital pharmacy to be self-administered at home with or without the assistance of community based nursing staff."/>
</concept>
<concept>
<code value="primarycare"/>
<display value="Primary Care"/>
<definition value="Requests for medications originating in a primary care setting. Typically requests would be dispensed by the patients nominated pharmacy to be self-administered at home with or without the assistance of community based nursing staff."/>
<property>
<code value="inactive"/>
<valueBoolean value="True"/>
</property>
</concept>
</CodeSystem>
31 changes: 31 additions & 0 deletions codesystems/CodeSystem-UKCore-PeriodType.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,31 @@
<CodeSystem xmlns="http://hl7.org/fhir">
<id value="UKCore-PeriodType"/>
<url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-PeriodType"/>
<version value="1.0.0"/>
<name value="UKCorePeriodType"/>
<title value="UK Core Period Type"/>
<status value="draft" />
<date value="2023-10-13" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
<telecom>
<system value="email" />
<value value="[email protected]" />
<use value="work" />
<rank value="1" />
</telecom>
</contact>
<description value="CodeSystem to identify the type of period data being recorded."/>
<copyright value="Copyright &#169; 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an &quot;AS IS&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7&#174; FHIR&#174; standard Copyright &#169; 2011+ HL7 The HL7&#174; FHIR&#174; standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." />
<caseSensitive value="true"/>
<content value="complete"/>
<concept>
<code value="legal"/>
<display value="Legal"/>
</concept>
<concept>
<code value="operational"/>
<display value="Operational"/>
</concept>
</CodeSystem>
10 changes: 7 additions & 3 deletions codesystems/CodeSystem-UKCore-PreferredContactMethod.xml
Original file line number Diff line number Diff line change
Expand Up @@ -2,11 +2,11 @@
<CodeSystem xmlns="http://hl7.org/fhir">
<id value="UKCore-PreferredContactMethod" />
<url value="https://fhir.hl7.org.uk/CodeSystem/UKCore-PreferredContactMethod" />
<version value="2.1.0" />
<version value="2.2.0" />
<name value="UKCorePreferredContactMethod" />
<title value="UK Core Preferred Contact Method" />
<status value="active" />
<date value="2021-09-10" />
<date value="2023-10-09" />
<publisher value="HL7 UK" />
<contact>
<name value="HL7 UK" />
Expand All @@ -17,7 +17,7 @@
<rank value="1" />
</telecom>
</contact>
<description value="A CodeSystem to identify the preferred contact method of a patient, contact or related person." />
<description value="A set of codes to identify the preferred contact method of a patient, contact or related person. These codes and their descriptions represent common communication methods and are originally sourced from the removed [NHS Data Dictionary PreferredContactMethod](https://data.developer.nhs.uk/dms/mim/3.1.09/Vocabulary/PreferredContactMethod.htm) list. SMS added 10/10/2023 for Galleri / Grail usage with a sequential code ID." />
<copyright value="Copyright &#169; 2021+ HL7 UK Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an &quot;AS IS&quot; BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7&#174; FHIR&#174; standard Copyright &#169; 2011+ HL7 The HL7&#174; FHIR&#174; standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html." />
<caseSensitive value="true" />
<content value="complete" />
Expand Down Expand Up @@ -53,4 +53,8 @@
<code value="8" />
<display value="No Telephone contact" />
</concept>
<concept>
<code value="9" />
<display value="SMS" />
</concept>
</CodeSystem>
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
<AllergyIntolerance xmlns="http://hl7.org/fhir">
<id value="UKCore-AllergyIntolerance-Sn-TransferDegradDrugAllergy-Example"/>
<id value="UKCore-AllergyIntolerance-Sn-TransferDegradedDrugAllergy-Example"/>
<clinicalStatus>
<coding>
<system value="http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical"/>
Expand Down
2 changes: 1 addition & 1 deletion examples/UKCore-Extension-BodySiteReference-Example.xml
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,7 @@
</coding>
</method>
<bodySite>
<!-- Use of the bodySite R5 backport extension to reference a BodyStucture, in this case, the draw site. -->
<!-- Use of the bodySite R5 backport extension to reference a BodyStructure, in this case, the draw site. -->
<extension url="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-BodySiteReference">
<valueReference>
<reference value="BodyStructure/UKCore-BodyStructure-MedianCubitalVeinExample"/>
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -51,7 +51,7 @@
<coding>
<system value="http://terminology.hl7.org/CodeSystem/service-provision-conditions"/>
<code value="free"/>
<display value=" This service is available for no patient cost."/>
<display value="This service is available for no patient cost."/>
</coding>
</serviceProvisionCode>
<program>
Expand Down
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
<Medication xmlns="http://hl7.org/fhir">
<id value="UKCore-Medication-Sn-TransferDegradMedEntry-Example"/>
<id value="UKCore-Medication-Sn-TransferDegradedMedEntry-Example"/>
<!-- **************Snippet start************** -->
<code>
<coding>
Expand Down
4 changes: 2 additions & 2 deletions structuredefinitions/Extension-UKCore-AnaestheticIssues.xml
Original file line number Diff line number Diff line change
Expand Up @@ -47,8 +47,8 @@
</element>
<element id="Extension.value[x]">
<path value="Extension.value[x]" />
<short value="Snomed Concept or a link to the Condition resource" />
<definition value="Snomed Concept or a link to the Condition resource." />
<short value="SNOMED CT Concept or a link to the Condition resource" />
<definition value="SNOMED CT Concept or a link to the Condition resource." />
<min value="1" />
<type>
<code value="CodeableConcept" />
Expand Down
Loading