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Combined pre-AGU GUI and Calibration Message Work #240
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Combined pre-AGU GUI and Calibration Message Work #240
Commits on Jan 18, 2023
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Fix fast-debug in dataservice image entrypoint.
Fixing logic where pip installs the updated packages (to avoid the entire image rebuild), so make sure deps are ignored (as this was the slow part).
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Add new QueryType for dataset management messages.
Adding type GET_SERIALIZED_FORM to get the entire serialized state of a dataset.
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Refactor ExternalRequestClient async_make_request.
Refactor to ensure it takes advantage of connection handling via its async context manager logic.
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Add get_serialized_datasets to external client.
Add new function to get serialized dataset details to DatasetExternalClient.
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Improve DatasetExternalClient.
Fix issue with not acquiring a session, and wrapping some things in try block to catch and log exceptions.
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Fix LIST_FILES query response bug in dataservice.
Fixing bug in response to LIST_FILES query, where reason text was not being assembled entirely correctly.
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Update dataset manager abstract interface.
Adding optional offset and length params to abstract interface definition of get_data, and adding get_file_stat abstract method.
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More QueryType elements and update DatasetQuery.
Adding support for querying about dataset items.
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Update dataset message to support start and size.
Updating to support indicating start and size of data for partial transfers.
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Optimize object store dataset reloading.
Optimizing the reloading of datasets on object store manager startup.
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Update object store manager for interface changes.
Accounting for changes to get_data parameters and implementing get_file_stat.
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Update dataservice response handling.
Updating service to respond to GET_DATASET_ITEMS queries and requests for data with an offset start (i.e. partials).
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Add second view and navigation.
Adding initial second view display and manage existing datasets, along with navigation functionality to toggle between "manage" and "create" views.
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Have DatasetManagementView.py send DS as list.
Sending serialized datasets to HTML template as list/array rather than dict/map.
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Update dataset management GUI with details view.
Implementing layout and initial details-viewing behavior for dataset management GUI view.
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Add commented-out helper debug volume for GUI.
Adding commented-out line for host bind-mount volume to GUI Docker service config to make debugging Django template and Javascript code faster by mounted code from the host into the running service.
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Refactor DatasetManagementView inheritance.
Make DatasetManagementView inherit from AbstractDatasetView so certain required pieces could be centrally located and reused.
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Adding Javascript component helper classes.
Adding several classes used by Dataset management GUI view.
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Update dataset management view template.
Cleanup, a bit of additional behavior, and attempts at getting downloads working.
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Add incomplete DatasetFileWebsocketFilelike.
Adding incomplete DatasetFileWebsocketFilelike class, since it is referenced by other things.
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Add generate_domain helper func to Hydrofabric.
Adding abstract function to Hydrofabric interface, and implementing in GeoJsonHydrofabric subtype; also adjusting MappedGraphHydrofabric to be abstract since it cannot implement generate_domain currently (as there is no applicable DataFormat value to use for it).
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Add specialized geojson subset handler subclass.
Adding new GeoJsonBackedSubsetHandler extended from SubsetHandler to facilitate getting subset-specific GeoJSON data.
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Update subsetservice package dependencies.
Updating versions of dmod.core and dmod.modeldata.
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Adjust subsetservice to multiple geojson handlers.
Adjust service to use GeoJsonBackedSubsetHandler handlers specifically and to potentially support multiple hydrofabrics when not in CLI mode.
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Refactor and enhance DockerS3FSPluginHelper.
Generalizing existing behavior and adding specialized function for worker volumes.
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Add async func to manage hydrofabric datasets.
Adding function to manage the availability of hydrofabric datasets to entities that may need them (e.g., making sure special volumes are created for access to Docker containers).
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Update request_client to support overwrite.
Adding optional support for overwriting existing files when downloading.
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Use centralized static settings in DMODProxy.
Using common settings for SSL dir and MaaS endpoint URI.
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Have Docker S3FS helper check for existing vols.
Updating DockerS3FSPluginHelper with method to check whether volumes for datasets already exist.
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Let Docker S3FS helper remove existing service.
Updating DockerS3FSPluginHelper with method to remove an existing Docker service of the utilized name if it exists already.
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Let Docker S3FS helper sanity check vol better.
Updating DockerS3FSPluginHelper to refactor and improve how sanity checking is done for creating new S3FS plugin volumes for object store datasets, in particular moving logic to its own method for cleaner reading.
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Adjust/fix S3FS helper service management logic.
Updating and attempting to fix/improve logic in DockerS3FSPluginHelper for managing the volume-creating Docker service, making sure it has started properly, and cleaning it up after it is done.
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Adjust S3FS helper use to remove existing service.
Updating logic in data-service service manager to have the Docker S3FS helper member remove any existing service of the expected name before starting a new volume-create service.
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Fix strange issue with DockerFile for vol helper.
Fixing issue where somehow (despite this working before) the scripts directory was not recursively being copied (i.e., just the top-level).
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Account for new hydrofabric dir setting in map.
Accounting for the change in name for the hydrofabric root directory in MapView.py and crosswalk.py modules.
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Undo zoom-based subset lookup logic in map.js.
Commenting out start of work to load hydrofabrics based on whether the map had been zoomed into to a sufficent level, which was to be combined with loading just a subset of the desired hydrofabric (and may still be in the future).
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Fix map.js issue with newer hydrofabrics.
Fixing issue with map.js where the schema of newer versions of hydrofabrics was not allowing the id of catchment (and other) features to be read and used correctly.
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Updates to GUI ngen config form exec logic.
Updating to start logic for parsing what comes from form to the beginnings of a realization config, that can (later) be used to create a dataset for the job being requested.
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Fixing bugs in init of members in DmodClient.
Fixing bugs related to init of client member objects deriving from WebSocketClient.
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Fix GUI migrations issue from upstream changes.
Fixing issue from some upstream changes where migrations were necessary for dataset management GUI to function (even though they weren't used there) but were not run automatically.
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Update GUI Docker stack config for minio access.
Adding env vars that are used to populate static Django settings, along with Docker secrets for minio credentials.
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Update Dataset API view to cache and zip datasets.
Having GUI's DatasetApiView download and cache dataset files directly from MinIO and then bundle in downloadable zip file to support downloading entire datasets.
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Update dataset_management.html for downloads.
Updating to support downloading of entire zipped datasets.
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Update DatasetApiView function to download file.
Updating to fix function for individual dataset file downloads.
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Fix bug in GUI DatasetApiView for caching dataset.
Fixing issue where a previously existing cache subfolder for a dataset would not be cleaned up correctly when cleanup was needed and the function received an explicit collection of files to cache (note that this is not a normal state that will occur in the cache directory given the current code, but it could/did occur due to older versions of the code, and code changes could make this possible again in the future).
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fix dynamic form field node removal in CreateDatasetForm
Partially fixes NOAA-OWP#198. DOM elements were being removed using `forEach` this mutates the underling array and causes undesired side-effects.
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add django forms for DatasetManagementView.
first rough cut of forms. input types and validation still needs to be verified and shorted out.
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move DatasetFormatForm to bottom of DatasetManagementForms mod to mak…
…e python imports happy
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date time field accepts partial ISO8061 format. this is a work around…
…, should be changed once django version has been updated. NOAA-OWP#209 is tracking this
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wire-up labels in template and add comments about how form input's an…
…d label's interact
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disable all dynamic fields by default. fields must be disabled to sub…
…mit when display is set to none
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Move minio client factory to AbstractDatasetView.
Moving factory class method within DatasetApiView for creating a MinIO client object up a level to abstract superclass, to facilitate reuse.
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Cleanup refactor of DatasetApiView.py.
Reordering methods and removing unused imports.
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Fix create form in dataset_management.html.
Fixing template form for creating new datasets, both to make sure form has the right "action" destination and to ensure form handles multiple uploaded files.
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Adjust Django form for dataset create.
Updating Django form components for dataset creation form to support uploading multiple files and to utilize centralized setting for datetime format string.
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Ensure GUI app_server image installs dmod-core.
Ensure GUI app_server image installs latest dmod-core package, used directly as part of dataset creation.
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Fix issue with underscore in dataset file names.
Allowing underscores in dataset file names, which were incorrectly being forbidden by validation (only dataset names/buckets cannot have underscores).
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Add OS dependency geos-dev to py-deps image.
Adding the now-required dependency to list of installed apk packages in foundation stage of py-deps image.
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Enhance deserialization of NGENRequest.
Enhancing factory_init_from_deserialized_json function by adding and using new _additional_deserialized_args function (empty for this type) to allow separate mechanism for subclasses to use to prepare their own specific init params and still use base deserialization logic of NGENRequest.factory_init_from_deserialized_json().
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Add calibration request messages.
Adding new NgenCalibrationRequest and NgenCalibrationResponse classes.
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Bug in request handler service_client lazy init.
Fixing a bug in the ModelExecRequestHandler class's service_client property method, where the order of the positional arguments was incorrect.
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Add means for type-specific handler preprocessing.
Adding a function to ModelExecRequestHandler for any preprocessing that is needed before sending things to the scheduler (with it being an empty implementation for now), to allow subclasses a way to extend behavior.
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Update requestservice for changes to handler init.
Updating requestservice service class to account for changes in the names of init params for utilized request handler classes.
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fix NgenCalibrationResponse subclass type.
this also includes some commented out code that *might* need to be added in the future to support data_requirement dissemination
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dont add data to datasets as temporary. causes s3 Bucket is missing O…
…bjectLockConfiguration error
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NOTE: MAY REMOVE LATER. Hard coded dmod.client code for submitting ng…
…en calibration jobs
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Fix bug with duplicate kwargs for NGENRequest.
Fixing bug in deserialization function where processed (i.e., by this type) optional kwargs were being combined into list of additional (i.e., potentially by subtypes) additional kwargs to be passed to __init__, with both lists being passed instead of just the combined.
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Fix hydrofab subset test for abstraction change.
Fixing setup for TestSimpleHydrofabricSubset that used the MappedGraphHydrofabric class after it was made abstract, replacing its use with its GeoJsonHydrofabric subtype.
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Commits on Jan 20, 2023
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Fix request service arg handling of eval details.
Fixing argument handling for those args related to communicating with evaluation service, including the dest name for args, defaults, and use when creating main service handler class.
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Fix bugs/spacing in request srv handler for eval.
Fixing imports, class usage, and code style spacing for several things related to evaluation requests within main request-service handler class.
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