Remove use of GLOB.

Using GLOB is against recommend CMake best practices.

lib/tinyxml/CMakeLists.txt

@@ -1,4 +1,10 @@
-file(GLOB sources *.cpp)
+# set source files
+set(SOURCES
+    tinystr.cpp
+    tinyxml.cpp
+    tinyxmlerror.cpp
+    tinyxmlparser.cpp
+)
 
-add_library(tinyxml STATIC ${sources})
+add_library(tinyxml STATIC ${SOURCES})
 target_include_directories(tinyxml PUBLIC ${CMAKE_SOURCE_DIR})

src/CMakeLists.txt

@@ -1,5 +1,23 @@
-file(GLOB sources *.cpp)
-add_executable(transfil_N ${sources})
+
+# set source files
+set(SOURCES
+    BedNetEvent.cpp
+    Host.cpp
+    ImportationRateEvent.cpp
+    MDAEvent.cpp
+    Model.cpp
+    Output.cpp
+    Population.cpp
+    PrevalenceEvent.cpp
+    RecordedPrevalence.cpp
+    Scenario.cpp
+    ScenariosList.cpp
+    Statistics.cpp
+    Vector.cpp
+    Worm.cpp
+    main.cpp
+)
+add_executable(transfil_N ${SOURCES})
 
 find_package(GSL REQUIRED)
 # Include the library directories for linking