Merge pull request #2 from gold2718/share

Workshop contributions from Steve

share/ReproExperimentScript.sh

@@ -0,0 +1,96 @@
+#! /bin/bash
+## Run an out-of-the-box N2000 experiment
+##    but with reduced output.
+
+## Experiment basics, modify these for your experiment
+TAG=${TAG:-"release-noresm2.0.7"}
+COMPSET=${COMPSET:-"N2000"}
+RES=${RES:-"f19_tn14"}
+SRCROOT=${SRCROOT:-"/cluster/projects/nn1001k/xxUSERxx/NorESM"}
+CASEDIR=${CASEDIR:-"/cluster/work/users/xxUSERxx/cases"}
+REPO=${REPO:-"https://github.com/NorESMhub/NorESM"}
+PROJECT=${PROJECT:-"nn9039k"}
+STOP_OPTION=${STOP_OPTION:-"ndays"}
+STOP_N=${STOP_N:-"5"}
+
+perror() {
+  ## Print an error message and exit if a non-zero error code is passed
+  if [ $1 -ne 0 ]; then
+    echo "ERROR (${1}): ${2}"
+    exit $1
+  fi
+}
+
+## Decide whether or not to run manage_externals/checkout_externals
+## While this is not perfect, it works if used consistently
+## NB: If you check out the target tag from outside the script,
+## be sure to run checkout_externals yourself, this script might
+## miss it.
+RUN_CHECKOUT="no"
+
+## (make sure that clone exists, otherwise, clone REPO)
+if [ ! -d "${SRCROOT}" ]; then
+    git clone -o NorESM ${REPO} ${SRCROOT}
+    perror $? "running 'git clone -o NorESM ${REPO} ${SRCROOT}'"
+    RUN_CHECKOUT="yes"
+fi
+
+## Ensure correct source is checked out
+cd ${SRCROOT}
+if [ "$( git describe )" != "${TAG}" ]; then
+    git checkout ${TAG}
+    perror $? "running 'git checkout ${TAG}'"
+    RUN_CHECKOUT="yes"
+fi
+if [ "${RUN_CHECKOUT}" != "no" ]; then
+    ./manage_externals/checkout_externals
+    perror $? "running './manage_externals/checkout_externals'"
+fi
+
+## Create your case
+## Because the TAG above is a techical release most compset / res
+##    combinations are unsuported.
+if [ ! -d "${CASEDIR}" ]; then
+    ## Only run create_newcase if the case does not exist
+    cn_args=" --case ${CASEDIR} --compset ${COMPSET} --res ${RES} --project ${PROJECT}"
+    cn_args="${cn_args} --run-unsupported"
+    ./cime/scripts/create_newcase ${cn_args}
+    perror $? "running './cime/scripts/create_newcase ${cn_args}'"
+fi
+
+## Move to your case directory
+cd ${CASEDIR}
+perror $? "trying 'cd ${CASEDIR}'"
+
+## Any PE changes must go here
+
+## Set up the case as configured so far
+if [ ! -f "CaseStatus" ]; then
+    ## Setup the case if it looks like it has not been setup
+    ./case.setup
+    perror $? "trying './case.setup'"
+fi
+
+## Changes that affect the build go here
+# Testing a short run first with DEBUG=TRUE is valuable
+#    Comment out change for longer runs
+#./xmlchange DEBUG=TRUE
+#perror $? "trying './xmlchange DEBUG=TRUE'"
+./xmlchange STOP_OPTION=${STOP_OPTION},STOP_N=${STOP_N}
+perror $? "trying './xmlchange STOP_OPTION=${STOP_OPTION},STOP_N=${STOP_N}'"
+
+## Build the model
+./case.build
+perror $? "trying './case.build'"
+
+## Last chance to modify run-time settings
+cat <<EOF >> user_nl_cam
+history_chemistry       = .false.
+history_chemspecies_srf = .false.
+history_clubb           = .false.
+EOF
+perror $? "adding variables to user_nl_cam"
+
+## Submit the job
+./case.submit
+perror $? "trying './case.submit'"

share/ReproExperimentScriptSimple.sh

@@ -0,0 +1,53 @@
+#! /bin/bash
+## Run an out-of-the-box N2000 experiment for 13 months
+##    but with reduced output.
+
+## Experiment basics, modify these for your experiment
+TAG="release-noresm2.0.7"
+COMPSET="N2000"
+RES="f19_tn14"
+SRCROOT="/cluster/projects/nn1001k/xxUSERxx/NorESM"
+CASEDIR="/cluster/work/users/xxUSERxx/cases"
+REPO="https://github.com/NorESMhub/NorESM"
+PROJECT="nn9039k"
+
+## (make sure that clone exists, otherwise, clone REPO)
+if [ ! -d "${SRCROOT}" ]; then
+    git clone -o NorESM ${REPO} ${SRCROOT}
+fi
+
+## Ensure correct source is checked out
+cd ${SRCROOT}
+git checkout ${TAG}
+./manage_externals/checkout_externals
+
+## Create your case
+## Because the TAG above is a techical release most compset / res
+##    combinations are unsuported.
+./cime/scripts/create_newcase --case ${CASEDIR} --compset ${COMPSET} --res ${RES} \
+    --project ${PROJECT} --run-unsupported
+
+## Move to your case directory
+cd ${CASEDIR}
+
+## Any PE changes must go here
+
+## Set up the case as configured so far
+./case.setup
+
+## Changes that affect the build go here
+# Testing a short run first with DEBUG=TRUE is valuable
+#    Comment out change for longer runs
+#./xmlchange DEBUG=TRUE
+./xmlchange STOP_OPTION=nmonths,STOP_N=13
+
+## Build the model
+./case.build
+
+## Last chance to modify run-time settings
+echo "history_chemistry       = .false." >> user_nl_cam
+echo "history_chemspecies_srf = .false." >> user_nl_cam
+echo "history_clubb           = .false." >> user_nl_cam
+
+## Submit the job
+./case.submit