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Merge branch 'main' into sort-configure-packages
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echoix committed Nov 2, 2024
2 parents 63992aa + 0824e88 commit f62f0a3
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40 changes: 12 additions & 28 deletions .flake8
Original file line number Diff line number Diff line change
Expand Up @@ -15,20 +15,16 @@ per-file-ignores =
# E501 line too long
# E722 do not use bare 'except'
# W605 invalid escape sequence
# F401 imported but unused
# F821 undefined name 'unicode'
# F841 local variable assigned to but never used
# E741 ambiguous variable name 'l'
__init__.py: F401, F403
__init__.py: F403
man/build_html.py: E501
doc/python/m.distance.py: E501
gui/scripts/d.wms.py: E501
gui/wxpython/image2target/g.gui.image2target.py: E501
gui/wxpython/modules/*: F841, E722
gui/wxpython/nviz/*: E722, F403, F405
gui/wxpython/photo2image/*: F841, E722, E265
gui/wxpython/photo2image/g.gui.photo2image.py: E501, F841
gui/wxpython/psmap/*: F841, E266, E722
gui/wxpython/photo2image/g.gui.photo2image.py: E501
gui/wxpython/psmap/*: E501, E722
gui/wxpython/vdigit/*: F841, E722, F405, F403
gui/wxpython/animation/g.gui.animation.py: E501
gui/wxpython/tplot/frame.py: F841, E722
Expand Down Expand Up @@ -67,10 +63,8 @@ per-file-ignores =
python/grass/pygrass/vector/__init__.py: E402
python/grass/pygrass/raster/__init__.py: E402
python/grass/pygrass/vector/__init__.py: E402
python/grass/pygrass/modules/interface/*.py: F401
python/grass/pygrass/modules/grid/*.py: F401
python/grass/pygrass/raster/category.py: E721
python/grass/pygrass/rpc/__init__.py: F401, F403
python/grass/pygrass/rpc/__init__.py: F403
python/grass/pygrass/utils.py: E402
python/grass/temporal/abstract_space_time_dataset.py: E722
python/grass/temporal/c_libraries_interface.py: E722
Expand All @@ -83,40 +77,30 @@ per-file-ignores =
python/grass/temporal/temporal_topology_dataset_connector.py: E722
# Current benchmarks/tests are changing sys.path before import.
# Possibly, a different approach should be taken there anyway.
python/grass/pygrass/tests/benchmark.py: E402, F401, F821
python/grass/pygrass/tests/benchmark.py: E402, F821
# Configuration file for Sphinx:
# Ignoring import/code mix and line length.
# Files not managed by Black
python/grass/imaging/images2gif.py: E226
# Unused imports in init files
# F401 imported but unused
# F403 star import used; unable to detect undefined names
python/grass/*/__init__.py: F401, F403
python/grass/*/*/__init__.py: F401, F403
python/grass/*/*/*/__init__.py: F401, F403
python/grass/*/*/__init__.py: F403
python/grass/*/*/*/__init__.py: F403
# E402 module level import not at top of file
scripts/r.in.wms/wms_gdal_drv.py: E722
scripts/r.in.wms/wms_drv.py: E402, E722
scripts/r.in.wms/srs.py: E722
scripts/r.semantic.label/r.semantic.label.py: E501
scripts/v.report/v.report.py: E721
scripts/db.out.ogr/db.out.ogr.py: F841
scripts/g.extension/g.extension.py: F841, E722, E501
scripts/v.unpack/v.unpack.py: E722, E501
scripts/v.import/v.import.py: E722, E501
scripts/g.extension/g.extension.py: E501
scripts/v.unpack/v.unpack.py: E501n
scripts/v.import/v.import.py: E501
scripts/db.univar/db.univar.py: E501
scripts/d.frame/d.frame.py: E722
scripts/i.pansharpen/i.pansharpen.py: E722, E501
scripts/r.in.srtm/r.in.srtm.py: E722
scripts/r.fillnulls/r.fillnulls.py: E722
scripts/d.rast.edit/d.rast.edit.py: E722
scripts/i.pansharpen/i.pansharpen.py: E501
scripts/v.what.strds/v.what.strds.py: E501
# Line too long (esp. module interface definitions)
scripts/*/*.py: E501
temporal/t.rast.to.vect/t.rast.to.vect.py: E501
temporal/t.vect.algebra/t.vect.algebra.py: E501
# ## used (##% key: r etc)
temporal/t.rast.what/t.rast.what.py: E265, E266, E501
temporal/t.rast.what/t.rast.what.py: E501
# Line too long (esp. module interface definitions)
temporal/*/*.py: E501

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4 changes: 2 additions & 2 deletions .github/workflows/additional_checks.yml
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ jobs:

steps:
- name: Checkout repository contents
uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
fetch-depth: 31

Expand All @@ -43,7 +43,7 @@ jobs:
exclude: mswindows .*\.bat .*/testsuite/data/.*

- name: Set up Python
uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: '3.10'

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2 changes: 1 addition & 1 deletion .github/workflows/clang-format-check.yml
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ jobs:
name: Formatting Check
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
persist-credentials: false
- uses: DoozyX/clang-format-lint-action@c71d0bf4e21876ebec3e5647491186f8797fde31 # v0.18.2
Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/codeql-analysis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -40,9 +40,9 @@ jobs:

steps:
- name: Checkout repository
uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- name: Set up Python
uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: '3.x'
- name: Install non-Python dependencies
Expand All @@ -56,7 +56,7 @@ jobs:
if: ${{ matrix.language == 'c-cpp' }}

- name: Initialize CodeQL
uses: github/codeql-action/init@f779452ac5af1c261dce0346a8f964149f49322b # v3.26.13
uses: github/codeql-action/init@662472033e021d55d94146f66f6058822b0b39fd # v3.27.0
with:
languages: ${{ matrix.language }}
config-file: ./.github/codeql/codeql-config.yml
Expand All @@ -81,6 +81,6 @@ jobs:
run: .github/workflows/build_ubuntu-22.04.sh "${HOME}/install"

- name: Perform CodeQL Analysis
uses: github/codeql-action/analyze@f779452ac5af1c261dce0346a8f964149f49322b # v3.26.13
uses: github/codeql-action/analyze@662472033e021d55d94146f66f6058822b0b39fd # v3.27.0
with:
category: "/language:${{matrix.language}}"
2 changes: 1 addition & 1 deletion .github/workflows/coverity.yml
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@ jobs:
runs-on: ubuntu-22.04
if: github.repository == 'OSGeo/grass'
steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2

- name: Get dependencies
run: |
Expand Down
6 changes: 3 additions & 3 deletions .github/workflows/create_release_draft.yml
Original file line number Diff line number Diff line change
Expand Up @@ -30,12 +30,12 @@ jobs:
contents: write
steps:
- name: Checks-out repository
uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
ref: ${{ github.ref }}
fetch-depth: 0
- name: Set up Python
uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: '3.11'
- name: Create output directory
Expand Down Expand Up @@ -73,7 +73,7 @@ jobs:
sha256sum ${{ env.GRASS }}.tar.xz > ${{ env.GRASS }}.tar.xz.sha256
- name: Publish draft distribution to GitHub (for tags only)
if: startsWith(github.ref, 'refs/tags/')
uses: softprops/action-gh-release@c062e08bd532815e2082a85e87e3ef29c3e6d191 # v2.0.8
uses: softprops/action-gh-release@e7a8f85e1c67a31e6ed99a94b41bd0b71bbee6b8 # v2.0.9
with:
name: GRASS GIS ${{ github.ref_name }}
body: |
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/docker.yml
Original file line number Diff line number Diff line change
Expand Up @@ -49,7 +49,7 @@ jobs:

steps:
- name: Checkout
uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
fetch-depth: 0
- name: Docker meta
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/gcc.yml
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,7 @@ jobs:
fail-fast: false

steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- name: Get dependencies
run: |
sudo apt-get update -y
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/macos.yml
Original file line number Diff line number Diff line change
Expand Up @@ -44,7 +44,7 @@ jobs:
-mindepth 1 -maxdepth 1 -type f -print -delete
# Rehash to forget about the deleted files
hash -r
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- name: Get current date cache key segment
id: date
# Year and week of year so cache key changes weekly
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/osgeo4w.yml
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ jobs:
run: |
git config --global core.autocrlf false
git config --global core.eol lf
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- uses: msys2/setup-msys2@ddf331adaebd714795f1042345e6ca57bd66cea8 # v2.24.1
with:
path-type: inherit
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/periodic_update.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ jobs:
- name: Create URL to the run output
id: vars
run: echo "run-url=https://github.com/$GITHUB_REPOSITORY/actions/runs/$GITHUB_RUN_ID" >> $GITHUB_OUTPUT
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- name: "Check that autoconf scripts are up-to-date:"
run: |
rm -f config.guess config.sub
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/pytest.yml
Original file line number Diff line number Diff line change
Expand Up @@ -32,10 +32,10 @@ jobs:
PYTHONWARNINGS: always

steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2

- name: Set up Python
uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: ${{ matrix.python-version }}
cache: pip
Expand Down
8 changes: 4 additions & 4 deletions .github/workflows/python-code-quality.yml
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@ jobs:
# renovate: datasource=pypi depName=bandit
BANDIT_VERSION: "1.7.10"
# renovate: datasource=pypi depName=ruff
RUFF_VERSION: "0.7.0"
RUFF_VERSION: "0.7.2"

runs-on: ${{ matrix.os }}
permissions:
Expand All @@ -54,10 +54,10 @@ jobs:
echo Bandit: ${{ env.BANDIT_VERSION }}
echo Ruff: ${{ env.RUFF_VERSION }}
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2

- name: Set up Python
uses: actions/setup-python@f677139bbe7f9c59b41e40162b753c062f5d49a3 # v5.2.0
uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
with:
python-version: ${{ env.PYTHON_VERSION }}
cache: pip
Expand Down Expand Up @@ -135,7 +135,7 @@ jobs:
path: bandit.sarif

- name: Upload SARIF File into Security Tab
uses: github/codeql-action/upload-sarif@f779452ac5af1c261dce0346a8f964149f49322b # v3.26.13
uses: github/codeql-action/upload-sarif@662472033e021d55d94146f66f6058822b0b39fd # v3.27.0
with:
sarif_file: bandit.sarif

Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/super-linter.yml
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@ jobs:
statuses: write

steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
with:
# super-linter needs the full git history to get the
# list of files that changed across commits
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/test-nix.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ jobs:
contents: read

steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2

- name: Install nix
uses: DeterminateSystems/nix-installer-action@da36cb69b1c3247ad7a1f931ebfd954a1105ef14 # v14
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/titles.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ jobs:
runs-on: ubuntu-latest
steps:
- name: Checkout base repository (doesn't include the PR changes)
uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2
- name: Call PR title validation function
run: python utils/generate_release_notes.py check "${PR_TITLE}" "" ""
env:
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/ubuntu.yml
Original file line number Diff line number Diff line change
Expand Up @@ -59,7 +59,7 @@ jobs:
fail-fast: false

steps:
- uses: actions/checkout@eef61447b9ff4aafe5dcd4e0bbf5d482be7e7871 # v4.2.1
- uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2

- name: Invert inclusion list to an exclusion list
id: get-exclude
Expand Down
2 changes: 1 addition & 1 deletion .pre-commit-config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@ repos:
)
- repo: https://github.com/astral-sh/ruff-pre-commit
# Ruff version.
rev: v0.7.0
rev: v0.7.2
hooks:
# Run the linter.
- id: ruff
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2 changes: 1 addition & 1 deletion AUTHORS
Original file line number Diff line number Diff line change
Expand Up @@ -206,7 +206,7 @@ MS-Windows/Cygwin: Huidae Cho <grass4u gmail com>
Source code Quality assessment system
- SOCCER Labs at Ecole Polytechnique de Montreal, Canada
http://web.soccerlab.polymtl.ca/grass-evolution/grass-browsers/grass-index-en.html
http://lists.osgeo.org/mailman/listinfo/grass-qa
https://lists.osgeo.org/mailman/listinfo/grass-qa


GRASS 5.7/6.0: Primary authors of new source code
Expand Down
2 changes: 1 addition & 1 deletion Dockerfile
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# syntax=docker/dockerfile:1.10@sha256:865e5dd094beca432e8c0a1d5e1c465db5f998dca4e439981029b3b81fb39ed5
# syntax=docker/dockerfile:1.11@sha256:1f2be5a2aa052cbd9aedf893d17c63277c3d1c51b3fb0f3b029c6b34f658d057

# Note: This file must be kept in sync in ./Dockerfile and ./docker/ubuntu/Dockerfile.
# Changes to this file must be copied over to the other file.
Expand Down
4 changes: 2 additions & 2 deletions REQUIREMENTS.md
Original file line number Diff line number Diff line change
Expand Up @@ -49,7 +49,7 @@ Note: also the respective development packages (commonly named `xxx-dev` or
[https://facebook.github.io/zstd](https://facebook.github.io/zstd)
- **FFTW 2.x or 3.x** (library for computing the Discrete Fourier Transform),
required for `i.fft` and `i.ifft` and other modules
[http://www.fftw.org](http://www.fftw.org)
[https://fftw.org](https://fftw.org)
- **GEOS** (Geometry Engine library),
needed for `v.buffer` and adds extended options to the `v.select` module
[https://libgeos.org/](https://libgeos.org/)
Expand Down Expand Up @@ -81,7 +81,7 @@ Note: also the respective development packages (commonly named `xxx-dev` or
- **SQLite libraries** (for the SQLite database interface)
[https://www.sqlite.org](https://www.sqlite.org)
- **unixODBC** (for the ODBC database interface)
[http://www.unixodbc.org](http://www.unixodbc.org)
[https://www.unixodbc.org](https://www.unixodbc.org)
- **R Statistics** (for the R statistical language interface)
[https://cran.r-project.org](https://cran.r-project.org)
- **FreeType2** (for TrueType font support and `d.text.freetype`)
Expand Down
4 changes: 2 additions & 2 deletions TODO
Original file line number Diff line number Diff line change
Expand Up @@ -39,6 +39,6 @@ Imagery
-----------------
See also

http://trac.osgeo.org/grass/wiki/Grass7Planning
https://trac.osgeo.org/grass/wiki/Grass7Planning

http://trac.osgeo.org/grass/wiki/Grass8Planning
https://trac.osgeo.org/grass/wiki/Grass8Planning
2 changes: 1 addition & 1 deletion binaryInstall.src
Original file line number Diff line number Diff line change
Expand Up @@ -109,7 +109,7 @@ if [ $? -eq 0 ] ; then
IFS="$IFSSAVE"
if [ ! "$GUNZIP" ] ; then
echo "No gunzip installed. Please get from:"
echo " http://www.gnu.org/software/gzip/gzip.html"
echo " https://www.gnu.org/software/gzip/gzip.html"
exit
fi
else
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2 changes: 1 addition & 1 deletion configure.ac
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@
# Public License (>=v2). Read the file COPYING that
# comes with GRASS for details.
#
# MANUAL: http://www.gnu.org/software/autoconf/manual/autoconf.html
# MANUAL: https://www.gnu.org/software/autoconf/manual/autoconf.html
# http://savannah.gnu.org/projects/autoconf/
# Website for config.guess, config.sub:
# wget http://git.savannah.gnu.org/cgit/config.git/plain/config.guess
Expand Down
6 changes: 3 additions & 3 deletions db/db.login/main.c
Original file line number Diff line number Diff line change
Expand Up @@ -98,9 +98,9 @@ int main(int argc, char *argv[])
exit(EXIT_SUCCESS);
}

if (db_set_login2(driver->answer, database->answer, user->answer,
password->answer, host->answer, port->answer,
G_get_overwrite()) == DB_FAILED) {
if (db_set_login(driver->answer, database->answer, user->answer,
password->answer, host->answer, port->answer,
G_get_overwrite()) == DB_FAILED) {
G_fatal_error(_("Unable to set user/password"));
}

Expand Down
2 changes: 1 addition & 1 deletion db/drivers/mysql/db.c
Original file line number Diff line number Diff line change
Expand Up @@ -51,7 +51,7 @@ int db__driver_open_database(dbHandle *handle)
connpar.host, connpar.port, connpar.dbname, connpar.user,
connpar.password);

db_get_login2("mysql", name, &user, &password, &host, &port);
db_get_login("mysql", name, &user, &password, &host, &port);

connection = mysql_init(NULL);
res =
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2 changes: 1 addition & 1 deletion db/drivers/mysql/grass-mesql.html
Original file line number Diff line number Diff line change
Expand Up @@ -83,7 +83,7 @@ <h2>AUTHOR</h2>

<p>
Credits: Development of the driver was sponsored by
<a href="http://www.faunalia.it">Faunalia</a> (Italy)
<a href="https://www.faunalia.it">Faunalia</a> (Italy)
as part of a project for <a href="http://www.atac.roma.it/">ATAC</a>.


Expand Down
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