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1. TDA-cancerSubtypes TDA-cancerSubtypes Public

   Topological Approach for Cancer Subtyping from Gene Expression Data

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2. CS_Sub_Weighted_DR_GMM CS_Sub_Weighted_DR_GMM Public

   R code for the paper, "Weighted dimensionality reduction and robust Gaussian mixture model based cancer patient subtyping from gene expression data"

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3. Manifold_Alignment Manifold_Alignment Public

   Manifold Alignment of Single Cell data

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4. COPD_Subtyping COPD_Subtyping Public

   Using topological data analysis to make useful network graphs of COPD expression data (GSE76705).

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5. MethVAE MethVAE Public

   Variational Autoencoder (VAE) in PyTorch for Methylation data

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6. slurm-parallel-processing slurm-parallel-processing Public

   Slurm parallel processing example. Includes a toy methylation dataset and linear regression model code.

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