full_tests #1288
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name: full_tests | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
branches: | |
- main | |
schedule: | |
# nightly tests, 2 am | |
- cron: "0 2 * * *" | |
concurrency: | |
# Probably overly cautious group naming. | |
# Commits to develop/master will cancel each other, but PRs will only cancel | |
# commits within the same PR | |
group: "${{ github.ref }}-${{ github.head_ref }}" | |
cancel-in-progress: true | |
defaults: | |
run: | |
shell: bash -leo pipefail {0} | |
jobs: | |
test: | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
# Note: we temporarily pin to macos-12 to avoid compatibility issues | |
# between AT22+ and macos-13+ runners | |
os: ["ubuntu-latest", "macos-latest"] | |
python-version: ["3.10"] | |
steps: | |
- uses: actions/[email protected] | |
- name: Get current date | |
id: date | |
run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}" | |
- uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: .binder/environment.yml | |
cache-environment: true | |
cache-downloads: true | |
cache-environment-key: environment-${{ steps.date.outputs.date }} | |
cache-downloads-key: downloads-${{ steps.date.outputs.date }} | |
create-args: >- | |
python=${{ matrix.python-version }} | |
init-shell: bash | |
- name: Additional info about the build | |
run: | | |
uname -a | |
df -h | |
ulimit -a | |
- name: Environment Information | |
run: | | |
micromamba info | |
micromamba list | |
- name: Run example notebooks | |
run: | | |
python -m pytest -v setup/ showcase/ cookbook/ openmm_rbfe/ networks/ --nbval-lax --nbval-cell-timeout=3000 -n auto --dist loadscope |