addin gsettigns section

rbfe_tutorial/cli_tutorial.md

@@ -101,22 +101,30 @@ how these simulation are set up:
    minimum distance of 1.2 nm from the solute to the edge of the box.
 4. The protocol used is OpenFE's OpenMM-based Hybrid Topology RFE protocol, with [default settings](https://docs.openfree.energy/en/stable/reference/api/openmm_rfe.html#protocol-settings).
 
-### Customize you Networkplanning with Settings - MORE HERE
-You can exchange settings in for the network planning using a `.yaml` file.
+## Customize you Campaign Setup
+
+OpenFE contains many different options and methods for setting up a calculation campaign. 
+The options can be easily accessed and modified with providing a settings 
+file in the `.yaml` format.
+Let's assume you want to exchange the LOMAP atom mapper with the Kartograf 
+atom mapper and the Minimal Spanning Tree
+Network Planner with the Maximal Network Planner, then you could do the following:
+1. provide a file like `settings.yaml` with the desired changes:
 ```yaml
 mapper:
   method: kartograf
 
 network:
   method: generate_maximal_network
 ```
-this you can simply loop in to your CLI command with the `-s` option and a e.g. 
-`settings.yaml` file:
+
+2. Plan your rbfe network with an additional `-s` flag for passing the settings:
 ```bash
 openfe plan-rbfe-network -M tyk2_ligands.sdf -p tyk2_protein.pdb -o network_setup -s settings.yaml
 ```
 
-you will be able to check your set Settings in the stdout of your shell:
+3. The output of the CLI program will now  reflect the made changes:
+
 ```text
 RBFE-NETWORK PLANNER
 ______________________
@@ -134,6 +142,27 @@ Using Options:
         Networker: functools.partial(<function generate_maximal_network at 0x7fea18371260>)
 ```
 
+That concludes the straightforward process of tailoring your OpenFE setup to your specifications. 
+Additionally, we've provided a snippet for generating YAML files with 
+various of the current options for your convenience. 
+
+Option Examples:
+
+```yaml
+mapper:
+  method: lomap
+  # method: kartograf
+
+network:
+  method: generate_minimal_spanning_network
+  # method: generate_radial_network
+  # method: generate_maximal_network
+  # method: generate_minimal_redundant_network
+```
+
+
+**Customize away!**
+
 ## Running the simulations
 
 For this tutorial, we have precalculated data that you can load, since