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pull down inputs for showcase
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mikemhenry committed May 1, 2024
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5 changes: 4 additions & 1 deletion showcase/openfe_showcase.ipynb
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" import condacolab\n",
" import locale\n",
" locale.getpreferredencoding = lambda: \"UTF-8\"\n",
" !mkdir inputs && cd inputs && openfe fetch rbfe-showcase\n",
" !mkdir inputs && cd inputs\n",
" # Replace hash with main before merge but after testing\n",
" !curl https://raw.githubusercontent.com/OpenFreeEnergy/ExampleNotebooks/777d72b1c4fc2b22a9bd94fe3fe84ec7063f8f19/showcase/inputs/tyk2_ligands.sdf -o tyk2_ligands.sdf\n",
" !curl https://raw.githubusercontent.com/OpenFreeEnergy/ExampleNotebooks/777d72b1c4fc2b22a9bd94fe3fe84ec7063f8f19/showcase/inputs/tyk2_protein.pdb -o tyk2_protein.pdb\n",
" for _ in range(3):\n",
" # Sometimes we have to re-run the check\n",
" try:\n",
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