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[DNM] Feature noneq cycling extends#46

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mikemhenry wants to merge 9 commits intomainOpenFreeEnergy/feflow:mainfrom feature-noneq_cycling_extendsOpenFreeEnergy/feflow:feature-noneq_cycling_extendsCopy head branch name to clipboard

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Commits on Apr 9, 2024

• Enabled extension of NonEquilibriumCyclingProtocol

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Commits on Apr 10, 2024

• Allow extending with replicates

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• [pre-commit.ci] auto fixes from pre-commit.com hooks

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Commits on Apr 12, 2024

• Updated serialization/compression of OpenMM objects

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• [pre-commit.ci] auto fixes from pre-commit.com hooks

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• Updated ValueError messages when extending

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• [pre-commit.ci] auto fixes from pre-commit.com hooks

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Commits on Apr 15, 2024

• Reduced loop count

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Commits on Apr 16, 2024

• Use gufe methods to determine if extends is ok

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