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Test cofactor networks generated with the CLI #3314

Test cofactor networks generated with the CLI

Test cofactor networks generated with the CLI #3314

Workflow file for this run

name: "mypy"
on:
pull_request:
branches:
- main
push:
branches:
- main
concurrency:
group: "${{ github.workflow }}-${{ github.ref }}"
cancel-in-progress: true
defaults:
run:
shell: bash -l {0}
jobs:
mypy:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Get current date
id: date
run: echo "date=$(date +%Y-%m-%d)" >> "${GITHUB_OUTPUT}"
- name: "Setup Micromamba"
uses: mamba-org/setup-micromamba@v1
with:
micromamba-version: '1.5.6-0'
environment-file: environment.yml
environment-name: openfe_env
cache-environment: true
cache-downloads: true
cache-environment-key: environment-${{ steps.date.outputs.date }}
cache-downloads-key: downloads-${{ steps.date.outputs.date }}
create-args: >-
python=3
rdkit=2023.09.5
init-shell: bash
- name: "Install steps"
run: |
python -m pip install --no-deps git+https://github.com/OpenFreeEnergy/gufe@main
python -m pip install mypy
python -m pip install types-pkg_resources
python -m pip install --no-deps -e .
- name: "Environment Information"
run: |
micromamba info
micromamba list
- name: "Lint with mypy"
run: mypy