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update LomapAtomMapper default settings to established best practices (…
…#730) * update LomapAtomMapper default settings to established best practices * fixup tests for relative_alchemical_network_planner following lomap default change make these tests use the legacy default settings for Lomap, they're just smoke testing and the actual mappings don't matter * fixup regression tests for command line plan-rbfe these are different now that the lomap defaults have been changed for 1.0 --------- Co-authored-by: Mike Henry <[email protected]>
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