Merge branch 'joss_preparation' into 'master'

add lpjml installation sentence in vignette

See merge request lpjml/lpjmlkit!99

.Rbuildignore

@@ -16,3 +16,4 @@
 ^CRAN-SUBMISSION$
 ^cran-comments\.md$
 ^.*CITATION.cff$
+^docs$

.buildlibrary

@@ -1,9 +1,8 @@
-ValidationKey: '3381470'
+ValidationKey: '3408030'
 AutocreateReadme: yes
 AcceptedWarnings:
 - 'Warning: package ''.*'' was built under R version'
 - 'Warning: namespace ''.*'' is not available and has been replaced'
-AcceptedNotes: ~
 allowLinterWarnings: no
 AddInReadme: inst/README.md
 AddLogoReadme: inst/img/logo.png

CITATION.cff

@@ -2,8 +2,8 @@ cff-version: 1.2.0
 message: If you use this software, please cite it using the metadata from this file.
 type: software
 title: 'lpjmlkit: Toolkit for Basic LPJmL Handling'
-version: 1.7.0
-date-released: '2024-06-17'
+version: 1.7.1
+date-released: '2024-07-26'
 abstract: A collection of basic functions to facilitate the work with the Dynamic
   Global Vegetation Model (DGVM) Lund-Potsdam-Jena managed Land (LPJmL) hosted at
   the Potsdam Institute for Climate Impact Research (PIK). It provides functions for
@@ -13,27 +13,30 @@ authors:
 - family-names: Breier
   given-names: Jannes
   email: [email protected]
-  orcid: 0000-0002-9055-6904
+  orcid: https://orcid.org/0000-0002-9055-6904
 - family-names: Ostberg
   given-names: Sebastian
   email: [email protected]
-  orcid: 0000-0002-2368-7015
+  orcid: https://orcid.org/0000-0002-2368-7015
 - family-names: Wirth
   given-names: Stephen Björn
   email: [email protected]
-  orcid: 0000-0003-3090-3318
+  orcid: https://orcid.org/0000-0003-3090-3318
 - family-names: Minoli
   given-names: Sara
   email: [email protected]
-  orcid: 0000-0001-7920-3107
+  orcid: https://orcid.org/0000-0001-7920-3107
 - family-names: Stenzel
   given-names: Fabian
   email: [email protected]
-  orcid: 0000-0002-5109-0048
+  orcid: https://orcid.org/0000-0002-5109-0048
+- family-names: Hötten
+  given-names: David
+  email: [email protected]
 - family-names: Müller
   given-names: Christoph
   email: [email protected]
-  orcid: 0000-0002-9491-3550
+  orcid: https://orcid.org/0000-0002-9491-3550
 license: AGPL-3.0
 repository-code: https://github.com/PIK-LPJmL/lpjmlkit
 doi: 10.5281/zenodo.7773134

CONTRIBUTING.md

@@ -6,8 +6,6 @@ We currently prefer contributions in the form of bug reports, feature requests,
 and suggestions of code improvements as issues in the
 [lpjmlkit GitHub repository](https://github.com/PIK-LPJmL/lpjmlkit/issues).
 If you want to contribute code, please follow the instructions below.
-Please note that due to our current worflow information on the authorship of
-code contributions may get lost.
 
 
 ## Getting Started

DESCRIPTION

@@ -1,13 +1,14 @@
 Package: lpjmlkit
 Type: Package
 Title: Toolkit for Basic LPJmL Handling
-Version: 1.7.0
+Version: 1.7.1
 Authors@R: c(
     person("Jannes", "Breier", , "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9055-6904")),
     person("Sebastian","Ostberg", , "[email protected]", role = "aut", comment = c(ORCID = "0000-0002-2368-7015")),
     person("Stephen Björn", "Wirth", , "[email protected]", role = "aut", comment = c(ORCID = "0000-0003-3090-3318")),
     person("Sara","Minoli", , "[email protected]", role = "aut", comment = c(ORCID = "0000-0001-7920-3107")),
     person("Fabian", "Stenzel", , "[email protected]", role = "aut", comment = c(ORCID = "0000-0002-5109-0048")),
+    person("David","Hötten", , "[email protected]", role = c("aut")),
     person("Christoph", "Müller", , "[email protected]", role = "aut", comment = c(ORCID = "0000-0002-9491-3550"))
   )
 Description: A collection of basic functions to facilitate the work with the
@@ -18,7 +19,7 @@ Description: A collection of basic functions to facilitate the work with the
     configuration files.
 License: AGPL-3
 LazyData: true
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
 Roxygen: list(markdown = TRUE,
               r6 = TRUE)
 Encoding: UTF-8
@@ -54,4 +55,4 @@ Suggests:
     sf
 Config/testthat/edition: 3
 VignetteBuilder: knitr
-Date: 2024-06-17
+Date: 2024-07-26

README.md

@@ -1,6 +1,6 @@
 # Toolkit for Basic LPJmL Handling <a href=''><img src='inst/img/logo.png' align='right' height='139' /></a>
 
-R package **lpjmlkit**, version **1.7.0**
+R package **lpjmlkit**, version **1.7.1**
 
 [![CRAN status](https://www.r-pkg.org/badges/version/lpjmlkit)](https://cran.r-project.org/package=lpjmlkit) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.7773134.svg)](https://doi.org/10.5281/zenodo.7773134) [![R build status](https://github.com/PIK-LPJmL/lpjmlkit/workflows/check/badge.svg)](https://github.com/PIK-LPJmL/lpjmlkit/actions) [![codecov](https://codecov.io/gh/PIK-LPJmL/lpjmlkit/branch/master/graph/badge.svg)](https://app.codecov.io/gh/PIK-LPJmL/lpjmlkit) [![r-universe](https://pik-piam.r-universe.dev/badges/lpjmlkit)](https://pik-piam.r-universe.dev/builds)
 
@@ -76,17 +76,17 @@ In case of questions / problems please contact Jannes Breier <jannesbr@pik-potsd
 
 To cite package **lpjmlkit** in publications use:
 
-Breier J, Ostberg S, Wirth S, Minoli S, Stenzel F, Müller C (2024). _lpjmlkit: Toolkit for Basic LPJmL Handling_. doi: 10.5281/zenodo.7773134 (URL: https://doi.org/10.5281/zenodo.7773134), R package version 1.7.0, <URL: https://github.com/PIK-LPJmL/lpjmlkit>.
+Breier J, Ostberg S, Wirth S, Minoli S, Stenzel F, Hötten D, Müller C (2024). _lpjmlkit: Toolkit for Basic LPJmL Handling_. doi:10.5281/zenodo.7773134 <https://doi.org/10.5281/zenodo.7773134>, R package version 1.7.1, <https://github.com/PIK-LPJmL/lpjmlkit>.
 
 A BibTeX entry for LaTeX users is
 
  ```latex
 @Manual{,
   title = {lpjmlkit: Toolkit for Basic LPJmL Handling},
-  author = {Jannes Breier and Sebastian Ostberg and Stephen Björn Wirth and Sara Minoli and Fabian Stenzel and Christoph Müller},
+  author = {Jannes Breier and Sebastian Ostberg and Stephen Björn Wirth and Sara Minoli and Fabian Stenzel and David Hötten and Christoph Müller},
   year = {2024},
-  note = {R package version 1.7.0},
-  doi = {10.5281/zenodo.7773134},
+  note = {R package version 1.7.1},
   url = {https://github.com/PIK-LPJmL/lpjmlkit},
+  doi = {10.5281/zenodo.7773134},
 }
 ```