Environment push

environment.yml

@@ -0,0 +1,8 @@
+name:
+  NXCore
+channels:
+  - bioconda
+  - conda-forge
+dependencies:
+  - python=3.10
+  - nextflow

requirements.txt

@@ -0,0 +1,64 @@
+attmap==0.13.2
+attrs==23.1.0
+cattrs==22.2.0
+certifi==2023.5.7
+cfgv==3.3.1
+charset-normalizer==3.1.0
+click==8.1.3
+distlib==0.3.6
+exceptiongroup==1.1.1
+filelock==3.12.0
+filetype==1.2.0
+future==0.18.3
+gitdb==4.0.10
+GitPython==3.1.31
+identify==2.5.24
+idna==3.4
+iniconfig==2.0.0
+Jinja2==3.1.2
+jsonschema==4.17.3
+logmuse==0.2.7
+Markdown==3.4.3
+markdown-it-py==2.2.0
+MarkupSafe==2.1.2
+mdurl==0.1.2
+nf-core==2.8
+nodeenv==1.8.0
+numpy==1.24.3
+oyaml==1.0
+packaging==23.1
+pandas==2.0.1
+piper==0.12.3
+platformdirs==3.5.1
+pluggy==1.0.0
+pre-commit==3.3.1
+prettier==0.0.7
+prompt-toolkit==3.0.38
+psutil==5.9.5
+pyfaidx==0.7.2.1
+Pygments==2.15.1
+pyrsistent==0.19.3
+pytest==7.3.1
+pytest-workflow==2.0.1
+python-dateutil==2.8.2
+pytz==2023.3
+PyYAML==6.0
+questionary==1.10.0
+refgenconf==0.12.2
+refgenie==0.12.1
+requests==2.30.0
+requests-cache==1.0.1
+rich==13.3.5
+rich-click==1.6.1
+six==1.16.0
+smmap==5.0.0
+tabulate==0.9.0
+tomli==2.0.1
+tqdm==4.65.0
+tzdata==2023.3
+ubiquerg==0.6.2
+url-normalize==1.4.3
+urllib3==2.0.2
+virtualenv==20.23.0
+wcwidth==0.2.6
+yacman==0.9.0