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@PixelgenTechnologies

Pixelgen Technologies

The Single Cell Spatial Proteomics Company

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  1. pixelator pixelator Public

    A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.

    Python 14 2

  2. pixelatorR pixelatorR Public

    Library for analysis of Molecular Pixelation data in R (Pixelgen Technologies AB)

    R 7

  3. pixelgen-MPX-paper pixelgen-MPX-paper Public

    Analysis code for the "Molecular Pixelation: Single-cell spatial proteomics by sequencing" paper

    R 2

  4. scanpy scanpy Public

    Forked from scverse/scanpy

    Single-cell analysis in Python. Scales to >1M cells.

    Python

  5. tools tools Public

    Forked from nf-core/tools

    Python package with helper tools for the nf-core community.

    Python

  6. adjusted-local-assortativity-paper adjusted-local-assortativity-paper Public

    Analysis code for the paper "Using Adjusted Local Assortativity with Molecular Pixelation unveils colocalization of membrane proteins with immunological significance"

    Jupyter Notebook

Repositories

Showing 10 of 11 repositories
  • pixelatorR Public

    Library for analysis of Molecular Pixelation data in R (Pixelgen Technologies AB)

    PixelgenTechnologies/pixelatorR’s past year of commit activity
    R 7 GPL-2.0 0 0 0 Updated Nov 29, 2024
  • pixelator Public

    A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.

    PixelgenTechnologies/pixelator’s past year of commit activity
    Python 14 MIT 2 0 1 Updated Nov 14, 2024
  • nf-core-pixelator Public Forked from nf-core/pixelator

    Pipeline to generate Molecular Pixelation data with Pixelator (Pixelgen Technologies AB)

    PixelgenTechnologies/nf-core-pixelator’s past year of commit activity
    Nextflow 0 MIT 4 0 0 Updated Nov 5, 2024
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    PixelgenTechnologies/bioconda-recipes’s past year of commit activity
    Shell 0 MIT 3,310 0 0 Updated Jul 16, 2024
  • test-datasets Public Forked from nf-core/test-datasets

    Test data to be used for automated testing with the nf-core pipelines

    PixelgenTechnologies/test-datasets’s past year of commit activity
    0 MIT 354 0 0 Updated Jul 12, 2024
  • adjusted-local-assortativity-paper Public

    Analysis code for the paper "Using Adjusted Local Assortativity with Molecular Pixelation unveils colocalization of membrane proteins with immunological significance"

    PixelgenTechnologies/adjusted-local-assortativity-paper’s past year of commit activity
    Jupyter Notebook 0 GPL-2.0 0 0 0 Updated Jul 4, 2024
  • pixelgen-MPX-paper Public

    Analysis code for the "Molecular Pixelation: Single-cell spatial proteomics by sequencing" paper

    PixelgenTechnologies/pixelgen-MPX-paper’s past year of commit activity
    R 2 GPL-2.0 0 0 0 Updated Feb 19, 2024
  • libpysal Public Forked from pysal/libpysal

    Core components of Python Spatial Analysis Library

    PixelgenTechnologies/libpysal’s past year of commit activity
    Python 0 78 0 0 Updated Oct 19, 2023
  • tools Public Forked from nf-core/tools

    Python package with helper tools for the nf-core community.

    PixelgenTechnologies/tools’s past year of commit activity
    Python 0 MIT 191 0 0 Updated Oct 16, 2023
  • pysal Public Forked from pysal/pysal

    PySAL: Python Spatial Analysis Library Meta-Package

    PixelgenTechnologies/pysal’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 304 0 0 Updated Oct 5, 2023
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