Updated error message for min_contig_length validation

Plant-Food-Research-Open · Dec 12, 2024 · 6f345b8 · 6f345b8
1 parent af407e6
commit 6f345b8
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/nextflow.config b/nextflow.config
@@ -84,7 +84,7 @@ params {
 process {
     beforeScript = """
         if [[ ${params.min_contig_length} -le 1000 ]]; then
-            echo "ERROR: The parameter 'min_contig_length' must be greater than 1 kbp (1000 base pairs). Provided value: ${params.min_contig_length}" >&2
+            echo "ERROR: The parameter 'min_contig_length' must be greater than 5 kbp (5000 base pairs). Provided value: ${params.min_contig_length}" >&2
             exit 1
         fi
     """