v0.8a

PombertLab · Sep 16, 2021 · 2649536 · 2649536
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diff --git a/Examples/FASTA/sequence_1.fasta b/Examples/FASTA/sequence_1.fasta
diff --git a/Examples/FASTA/sequence_2.fasta b/Examples/FASTA/sequence_2.fasta
diff --git a/Examples/FASTA/sequence_3.fasta b/Examples/FASTA/sequence_3.fasta
diff --git a/Examples/FASTA/sequences.fasta b/Examples/FASTA/sequences.fasta
@@ -0,0 +1,10 @@
+>ECU03_1140-t26_1-p1 | transcript=ECU03_1140-t26_1 | gene=ECU03_1140 | organism=Encephalitozoon_cuniculi_GB-M1 | gene_product=hypothetical protein | transcript_product=hypothetical protein | location=AL590443:136975-137328(+) | protein_length=117 | sequence_SO=chromosome | SO=protein_coding | is_pseudo=false
+MTSRVGPPLRILSDSLKKLRRVSGAIFYGRREVSHVEIAGTCIDRGRVFARILDFCGEVL
+VEIGDQKIALGSSYLLVCKVQARSGGIGLHCKSAKRLGIFEEMFFWAEAVNLEGGLQ
+>ECU08_1425-t26_1-p1 | transcript=ECU08_1425-t26_1 | gene=ECU08_1425 | organism=Encephalitozoon_cuniculi_GB-M1 | gene_product=unspecified product | transcript_product=unspecified product | location=AL590448:159723-160001(-) | protein_length=92 | sequence_SO=chromosome | SO=protein_coding | is_pseudo=false
+MLRLLDIPVEGRTVYSFGKVRDKLENGKYEVSFREKTIIITTDRRLSIGSWIRMYGTFKS
+GVLRTIFVGELDGVDINLLEKAVRYVACRRKI
+>ECU06_1350-t26_1-p1 | transcript=ECU06_1350-t26_1 | gene=ECU06_1350 | organism=Encephalitozoon_cuniculi_GB-M1 | gene_product=hypothetical protein | transcript_product=hypothetical protein | location=AL590446:173094-173537(+) | protein_length=147 | sequence_SO=chromosome | SO=protein_coding | is_pseudo=false
+MPGIIYEGKGTNMEYADVFDSLVGDLKDDVLSLQLTNFDDVNHSYKSDGKCSMSVKDFDG
+YAENMPVKNVEYNGQKYIFMRSISDDAQPSQVFISVDGDERGRKRGMLITSFCGILRMIS
+TFDYQIANSVTAKIFKVLGEYSCEEEE
diff --git a/Examples/GESAMT.matches b/Examples/GESAMT.matches
diff --git a/Examples/GESAMT/sequence_1-k0.normal.gesamt b/Examples/GESAMT/sequence_1-k0.normal.gesamt
diff --git a/Examples/GESAMT/sequence_2-k0.normal.gesamt b/Examples/GESAMT/sequence_2-k0.normal.gesamt
diff --git a/Examples/GESAMT/sequence_3-k0.normal.gesamt b/Examples/GESAMT/sequence_3-k0.normal.gesamt
diff --git a/Examples/PDB/sequence_1-k0.pdb b/Examples/PDB/sequence_1-k0.pdb
diff --git a/Examples/PDB/sequence_2-k0.pdb b/Examples/PDB/sequence_2-k0.pdb
diff --git a/Examples/PDB/sequence_3-k0.pdb b/Examples/PDB/sequence_3-k0.pdb
diff --git a/Examples/Results_3DFI/FASTA/ECU03_1140.fasta b/Examples/Results_3DFI/FASTA/ECU03_1140.fasta
@@ -0,0 +1,3 @@
+>ECU03_1140
+MTSRVGPPLRILSDSLKKLRRVSGAIFYGRREVSHVEIAGTCIDRGRVFARILDFCGEVL
+VEIGDQKIALGSSYLLVCKVQARSGGIGLHCKSAKRLGIFEEMFFWAEAVNLEGGLQ
diff --git a/Examples/Results_3DFI/FASTA/ECU06_1350.fasta b/Examples/Results_3DFI/FASTA/ECU06_1350.fasta
@@ -0,0 +1,4 @@
+>ECU06_1350
+MPGIIYEGKGTNMEYADVFDSLVGDLKDDVLSLQLTNFDDVNHSYKSDGKCSMSVKDFDG
+YAENMPVKNVEYNGQKYIFMRSISDDAQPSQVFISVDGDERGRKRGMLITSFCGILRMIS
+TFDYQIANSVTAKIFKVLGEYSCEEEE
diff --git a/Examples/Results_3DFI/FASTA/ECU08_1425.fasta b/Examples/Results_3DFI/FASTA/ECU08_1425.fasta
@@ -0,0 +1,3 @@
+>ECU08_1425
+MLRLLDIPVEGRTVYSFGKVRDKLENGKYEVSFREKTIIITTDRRLSIGSWIRMYGTFKS
+GVLRTIFVGELDGVDINLLEKAVRYVACRRKI