Reads to stdin and writes to stdout, batch execution of workflows#69

Merged

reelmatt merged 16 commits intomasterfrom dev/cli

May 1, 2020

+127-13

Commits on Apr 18, 2020

Exception catching to display user friendly error message
Diego Struk
committed
Modified wording and preventing the user to run workflow without specifiying a location
Diego Struk
committed
Catching empty file directory in execute function
Diego Struk
committed
Removing print statement
Diego Struk
committed

Commits on Apr 22, 2020

Reading input from stdin and executing workflow based on that input
Diego Struk
committed
Removing print statment
Diego Struk
committed

Commits on Apr 23, 2020

Continue with execution if there is no input from stdin
Diego Struk
committed
Allowing to execute workflow from CLI with or without input from stdin
Diego Struk
committed
Handles multiple file input from std_in
Diego Struk
committed

Commits on Apr 27, 2020

Merges master into branch
Diego Struk
committed

Commits on Apr 28, 2020

Adapts reading from stdin to node refactoring
Diego Struk
committed
Removed print statement
Diego Struk
committed
Modify command for execution to pyworkflow execute workflow-file-location
Diego Struk
committed
Batch execution of workflow
Diego Struk
committed
Updates readme
Diego Struk
committed

Commits on Apr 30, 2020

fixes review comments
Diego Struk
committed