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 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: f48f1cab54c8fc22d508ee046978374a
+config: a857dedc441f4a67caeab43b95b0dc69
 tags: 645f666f9bcd5a90fca523b33c5a78b7
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diff --git a/_sources/analysis_workflows/1_established_workflows.md b/_sources/analysis_workflows/1_established_workflows.md
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+# Established workflows
+
+
+``````{admonition} Minimal 
+:class: warning
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_cite.svg" width="50px"> &nbsp; Cite workflow & platform
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_key_settings.svg" width="50px"> &nbsp; Key settings
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_example.svg" width="50px"> &nbsp; Example data
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_roi.svg" width="50px"> &nbsp; Manual ROIs
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_version.svg" width="50px"> &nbsp; Exact version
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Recommended
+:class: note
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_all_settings.svg" width="50px"> &nbsp; All settings
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_public_example.svg" width="50px"> &nbsp; Public example
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Ideal
+:class: tip
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_screen_recording.svg" width="50px"> &nbsp; Document usage (e.g. screen recording or tutorial)
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_cloud_container.svg" width="50px"> &nbsp; Cloud hosted or container
+````` 
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+
+``````
+
+<!--Notes which will not be shown on the actual page-->
diff --git a/_sources/analysis_workflows/2_new_workflows.md b/_sources/analysis_workflows/2_new_workflows.md
@@ -0,0 +1,125 @@
+# New workflows
+
+``````{admonition} Minimal 
+:class: warning
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_cite.svg" width="50px"> &nbsp; Cite components & platform
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_describe_sequence.svg" width="50px"> &nbsp; Describe sequence
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_key_settings.svg" width="50px"> &nbsp; Key settings
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_example_data_code.svg" width="50px"> &nbsp; Example data & code
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_roi.svg" width="50px"> &nbsp; Manual ROIs
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_version.svg" width="50px"> &nbsp; Exact versions
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Recommended
+:class: note
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_all_settings.svg" width="50px"> &nbsp; All settings
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_public_example.svg" width="50px"> &nbsp; Public example data & code
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_rationale.svg" width="50px"> &nbsp; Rationale
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_limitations.svg" width="50px"> &nbsp; Limitations
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Ideal
+:class: tip
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_screen_recording.svg" width="50px"> &nbsp; Screen recording or tutorial
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_easy_install.svg" width="50px"> &nbsp; Easy install & usage, container
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+<!--Notes which will not be shown on the actual page-->
diff --git a/_sources/analysis_workflows/3_machine_learning_workflows.md b/_sources/analysis_workflows/3_machine_learning_workflows.md
@@ -0,0 +1,90 @@
+# Machine learning workflows
+
+``````{admonition} Minimal
+:class: warning
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_cite.svg" width="50px"> &nbsp; Cite original method
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_model.svg" width="50px"> &nbsp; Access to model
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_example.svg" width="50px"> &nbsp; Example or validation data
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Recommended (Pre-trained & novel models)
+:class: note
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_train_test_metadata.svg" width="50px"> &nbsp; Train, test & metadata
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_code.svg" width="50px"> &nbsp; Code available
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_limitations.svg" width="50px"> &nbsp; Limitations
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_cloud_container.svg" width="50px"> &nbsp; Cloud hosted or container
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+``````{admonition} Ideal (novel models)
+:class: tip
+
+`````{dropdown} <img src="/analysis_workflows/icons_analysis_workflows/icon_model_format.svg" width="50px"> &nbsp; Standardized format
+````{tab-set}
+```{tab-item} Description
+```
+```{tab-item} Links
+```
+````
+````` 
+
+``````
+
+<!--Notes which will not be shown on the actual page-->
diff --git a/_sources/analysis_intro.md → ...sis_workflows/intro_analysis_workflows.md b/_sources/analysis_intro.md → ...sis_workflows/intro_analysis_workflows.md
diff --git a/_sources/annotation.md b/_sources/annotation.md