packages to list for adrg

submission/pkgs4adrg.r

@@ -0,0 +1,20 @@
+#List out packages used for R analysis in the adrg.pdf
+
+library(tidyr)
+library(data.table)
+
+pkgloaded <- sessionInfo()$loadedOnly #get intial list of packages that were loaded
+pkgother <- sessionInfo()$otherPkgs #get initla list of packages that were also listed in the Session but may not have been used
+
+loaded <- data.frame(rbindlist(pkgloaded, idcol = TRUE, fill=T)) %>% 
+            select(Package, Title, Version, Description) %>% 
+            mutate(loaded='Y')
+other <- data.frame(rbindlist(pkgother, idcol = TRUE, fill=T)) %>% 
+            select(Package, Title, Version, Description) %>% 
+            mutate(loaded='N')
+
+pkgdesc <- bind_rows(loaded, other) # stacks all package data frames.
+# NOTE column 'loaded', from this data frame can be used to subset out packages not used and may not be needed for the adrg.pdf
+
+# update path to save CSV in your local area.  
+write.csv(pkgdesc, "/cloud/project/submission/pkgs4adrg.csv", row.names=FALSE)