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fix: script name
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boasvdp committed Jun 1, 2024
1 parent 56c1384 commit 6f1b113
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions workflow/rules/cauris_typing.smk
Original file line number Diff line number Diff line change
Expand Up @@ -72,10 +72,10 @@ rule cauris_extract_aa_mutations:
message:
"Extract AMR mutations for {wildcards.sample}"
log:
OUT + "/log/cauris_extract_amr_mutations/{sample}.log",
OUT + "/log/cauris_compare_aa_mutations/{sample}.log",
shell:
"""
python workflow/scripts/extract_amr_mutations.py \
python workflow/scripts/compare_aa_mutations.py \
--input {input.tsv} \
--output {output.tsv} \
--full-output {output.full} \
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