Merge pull request #2 from RIVM-bioinformatics/release-please--branch…

…es--main--components--juno_population

chore(main): release 0.1.0

CHANGELOG.md

@@ -0,0 +1,19 @@
+# Changelog
+
+## 0.1.0 (2022-11-16)
+
+
+### Features
+
+* Add --species to run_pipeline.sh. Fix: Correct input type from both to fasta. ([4a2594b](https://github.com/RIVM-bioinformatics/juno-population/commit/4a2594bc611568652ea9fa5e92841ec2a6df3cfc))
+* added --species and --database arguments and use these to set correct poppunk db_dir ([6e6c95c](https://github.com/RIVM-bioinformatics/juno-population/commit/6e6c95ce7b6f9e781ef61784ed994b4c98577ed0))
+* Create first version of rule for Q-file ([e1a6d4d](https://github.com/RIVM-bioinformatics/juno-population/commit/e1a6d4d3e5ed20e063900e66dfe32d18eff55f7a))
+* Create hardcoded version of popPUNK rule ([131de03](https://github.com/RIVM-bioinformatics/juno-population/commit/131de0379f8796c856a035ddc07706ebb14d2843))
+* Create summary rule. ([0f3e219](https://github.com/RIVM-bioinformatics/juno-population/commit/0f3e21915f2a82cbe7bb7ec3aa68926b91812b4e))
+
+
+### Bug Fixes
+
+* Add default species "other" in run_pipeline.sh ([931882c](https://github.com/RIVM-bioinformatics/juno-population/commit/931882c50b3b08ecf61650461305095da3a4ce2f))
+* Correctly handle --queue argument. ([7f0833a](https://github.com/RIVM-bioinformatics/juno-population/commit/7f0833a4f333c83230d986f4aa6a44658e3d12f7))
+* Specify juno-library version ([5b64764](https://github.com/RIVM-bioinformatics/juno-population/commit/5b647640458a9b488e580f4e70cb9165d16b602c))