fix test error

.github/workflows/ci.yml

@@ -21,10 +21,13 @@ jobs:
       - name: Build and test
         run: |
           docker compose version
+          # Ensure tests directory exists and is copied to the right place
+          mkdir -p docker/backend/tests
+          cp tests/test_api.py docker/backend/tests/
           docker compose -f docker-compose.dev.yml build
           docker compose -f docker-compose.dev.yml up -d
           docker compose -f docker-compose.dev.yml exec -T reproschema-server pip install pytest pytest-asyncio pytest-cov
-          docker compose -f docker-compose.dev.yml exec -T reproschema-server python -m pytest tests/
+          docker compose -f docker-compose.dev.yml exec -T reproschema-server python -m pytest /app/tests/
           docker compose -f docker-compose.dev.yml down
         env:
           # Core settings

docker-compose.dev.yml

@@ -1,4 +1,3 @@
-version: '3.8'
 services:
   reproschema-server:
     container_name: ${CONTAINER_NAME:-reproschema-server}
@@ -19,7 +18,7 @@ services:
       - ${DATA_PATH:-./data}:/data:rw
       # Development volumes
       - ./docker/backend:/app  # For live backend changes
-      - ./tests:/app/tests:ro  # Mount from project root, read-only
+      - ./docker/backend/tests:/app/tests:ro  # Mount from backend directory
     environment:
       # Core settings
       - NODE_ENV=${NODE_ENV:-development}  # Default to development

docs/api-testing.md

@@ -0,0 +1,59 @@
+# API Testing Guide
+
+## Overview
+This guide explains how to test the ReproSchema backend API endpoints manually.
+
+## Prerequisites
+- `curl` command-line tool
+- Running ReproSchema server (via `docker compose up`)
+- Initial token (found in backend logs)
+
+## Getting Started
+
+1. First, check the backend logs to get the initial token:
+
+
+2. Get an auth token using the initial token:
+
+
+
+3. Use the auth token to submit data:
+
+
+## API Endpoints
+
+### Health Check
+
+
+### Get Auth Token
+
+Parameters:
+- `token`: Initial token from backend logs
+- `project`: Project name (default: "study")
+- `expiry_minutes`: Token expiry in minutes (default: 90)
+
+### Submit Data
+
+Headers:
+- `Authorization`: Auth token from `/api/token` endpoint
+- `Content-Type`: Must be `application/json`
+
+### Get Schema
+
+
+## Data Storage
+Submitted responses are stored in:
+
+
+## Common Issues
+1. "Invalid token" error:
+   - Make sure you're using the correct initial token from logs
+   - Initial tokens are regenerated on container restart
+
+2. "Invalid auth token" error:
+   - Auth tokens expire after 90 minutes
+   - Get a new auth token using the initial token
+   - Don't include "Bearer " prefix in Authorization header
+
+## Development Testing
+For development mode features: