force the alphanumeric sorting of the tif files

SchapiroLabor · Oct 30, 2024 · c7ca74f · c7ca74f
1 parent fad9d8f
commit c7ca74f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/macsima2mc/mc_tools.py b/macsima2mc/mc_tools.py
@@ -47,7 +47,7 @@ def get_patterns():
 #file[key]=flatten_list( [ m.split('__') for m in extract_values( tup[0] , file_names,number_cast=tup[1] )] )
 
 def write_markers_file( data_path, ref_marker='DAPI'):
-	img_paths=list( data_path.glob('*.tif*') ) 
+	img_paths=list( sorted( data_path.glob('*.tif*') ) )
 	mks_file=markers_file()
 	patt=get_patterns()