1019 Adjust memilio-generation for flow models and automatic differentiation

[dr2001dlr]

Changes and Information

Please briefly list the changes (main added features, changed items, or corrected bugs) made:

-Scanner now checks for Flowmodel and Compartmentalmodel
-pymio includes fixed in template_string
-config.json does not need age_group, simulation and parameterset_wrapper annymore (scanner is setting those)
-added simulate and simulate_flows
-added interpolate_simulation_result and interpolate_ensemble_results
-added scalartype in intermediate_representation to set a datatype for bindings

If need be, add additional information and what the reviewer should look out for in particular:

-Check if the bindings are correct

Merge Request - Guideline Checklist

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Checks by code author

• Every addressed issue is linked (use the "Closes #ISSUE" keyword below)
• New code adheres to coding guidelines
• No large data files have been added (files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
• Tests are added for new functionality and a local test run was successful (with and without OpenMP)
• Appropriate documentation for new functionality has been added (Doxygen in the code and Markdown files if necessary)
• Proper attention to licenses, especially no new third-party software with conflicting license has been added
• (For ABM development) Checked benchmark results and ran and posted a local test above from before and after development to ensure performance is monitored.

Checks by code reviewer(s)

• Corresponding issue(s) is/are linked and addressed
• Code is clean of development artifacts (no deactivated or commented code lines, no debugging printouts, etc.)
• Appropriate unit tests have been added, CI passes, code coverage and performance is acceptable (did not decrease)
• No large data files added in the whole history of commits(files should in sum not exceed 100 KB, avoid PDFs, Word docs, etc.)
• On merge, add 2-5 lines with the changes (main added features, changed items, or corrected bugs) to the merge-commit-message. This can be taken from the briefly-list-the-changes above (best case) or the separate commit messages (worst case).

Closes #1019

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 96.95%. Comparing base (ff9df1e) to head (49e5ecc).
Report is 10 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1153      +/-   ##
==========================================
+ Coverage   96.88%   96.95%   +0.07%     
==========================================
  Files         140      148       +8     
  Lines       11502    13715    +2213     
==========================================
+ Hits        11144    13298    +2154     
- Misses        358      417      +59     

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