Added features / functionality:
- Allow output of mobility data for Graph-ODE model
- Added age resolution for LCT model
- Implementation of Generalized Linear Chain Trick model
- Allow variable dynamic NPI delay implementation
- Update of Damping now allows negative coefficients (i.e., contact increases)
- Added serialization to ABM
- Added functions for a person in the ABM to choose whether to comply to mask,test and isolation
- Allow explicit stepper wrappers (i.e., fixed step size numerical integrators)
- Bind different numerical integrators for python
- Allow download of population data for different years
- Plot functions for AST in generation package
General changes:
- Redesign of python bindings structure to improve typing
- Reduction of export_input_data_county_timeseries function
- Reduce use of get_support_max method in IDE model to reduce run time
- Handle Epidata FutureWarnings
Corrections:
- Error when compiling on Mac with new boost
- Missing includes in python bindings
- Deleted incorrect todo in ABM code
- divNj in ODE models creates NaN values if subpopulation is zero
- Get_default of parameter HighViralLoadProtectionFactor did not work as expected
Merged pull requests
- 1105 redesign bindings structure to improve typing by @MaxBetzDLR in #1106
- 1113 missing includes in python bindings by @MaxBetzDLR in #1114
- 1098 bind different integrators for python by @MaxBetzDLR in #1103
- 1118 Update of Damping not working with negative coefficients by @HenrZu in #1119
- 1028 Reduce export_input_data_county_timeseries by @HenrZu in #1029
- Delete incorrect todo in ABM code by @xsaschako in #1122
- 982 Make NPI delay implementation a parameter, set it and harmonize model advance functions by @mknaranja in #984
- Explicit stepper wrapper by @reneSchm in #1127
- 1123 population data for different years by @patricklnz in #1124
- 1102 divNj creates NaN values if subpopulation is 0 by @HenrZu in #1104
- 1039 Add functions for the Person to choose whether to comply to mask,test and isolation by @khoanguyen-dev in #1040
- 896 add age resolved lct model by @lenaploetzke in #1120
- 1117 reduce use of get support max method in ide model to reduce run time by @annawendler in #1129
- 1084 Handle Epidata FutureWarnings by @patricklnz in #1109
- 1138 plot functions for AST in generation package by @dr2001dlr in #1140
- 652 Add serialization to ABM by @reneSchm in #1072
- 55 Write mobility data by @HenrZu in #971
- 932 Get_default of Parameter HighViralLoadProtectionFactor doesn't work as expected by @khoanguyen-dev in #1068
- 946 implement generalized linear chain trick by @lenaploetzke in #1058
- 1021 Error when compiling on Mac with new boost by @reneSchm in #1146
Full Changelog: v1.2.1...v1.3.0