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requirements_bayesiankin.yaml
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requirements_bayesiankin.yaml
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name: bayesiankin
channels:
- pytorch
- anaconda
- defaults
- bioconda
- r
- conda-forge
dependencies:
- anyio=3.5.0=py37hecd8cb5_0
- appnope=0.1.2=py37hecd8cb5_1001
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py37hca72f7f_0
- attrs=21.4.0=pyhd3eb1b0_0
- babel=2.9.1=pyhd3eb1b0_0
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.11.1=py37hecd8cb5_0
- biopython=1.78=py37h9ed2024_0
- blas=1.0=mkl
- bleach=4.1.0=pyhd3eb1b0_0
- bottleneck=1.3.5=py37h67323c0_0
- brotli=1.0.9=hca72f7f_7
- brotli-bin=1.0.9=hca72f7f_7
- brotlipy=0.7.0=py37h9ed2024_1003
- bzip2=1.0.8=h1de35cc_0
- c-ares=1.18.1=hca72f7f_0
- ca-certificates=2022.9.24=h033912b_0
- certifi=2022.9.24=pyhd8ed1ab_0
- cffi=1.15.0=py37hc55c11b_1
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.0.4=py37hecd8cb5_0
- colorama=0.4.5=pyhd8ed1ab_0
- cryptography=37.0.1=py37hf6deb26_0
- cycler=0.11.0=pyhd3eb1b0_0
- dbus=1.13.18=h18a8e69_0
- debugpy=1.5.1=py37he9d5cce_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- entrypoints=0.4=py37hecd8cb5_0
- expat=2.4.4=he9d5cce_0
- ffmpeg=4.3=h0a44026_0
- fftw=3.3.9=h9ed2024_1
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.11.0=hd8bbffd_0
- gettext=0.21.0=h7535e17_0
- giflib=5.2.1=haf1e3a3_0
- glib=2.69.1=h8346a28_1
- gmp=6.2.1=he9d5cce_3
- gnutls=3.6.15=hed9c0bf_0
- h5py=3.7.0=py37h4a1dd59_0
- hdf5=1.10.6=h10fe05b_1
- icu=58.2=h0a44026_3
- idna=3.3=pyhd3eb1b0_0
- importlib-metadata=4.11.3=py37hecd8cb5_0
- importlib_metadata=4.11.3=hd3eb1b0_0
- importlib_resources=5.2.0=pyhd3eb1b0_1
- intel-openmp=2021.4.0=hecd8cb5_3538
- ipykernel=6.15.2=py37hecd8cb5_0
- ipython=7.31.1=py37hecd8cb5_1
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=7.6.5=pyhd3eb1b0_1
- jedi=0.18.1=py37hecd8cb5_1
- jinja2=3.0.3=pyhd3eb1b0_0
- joblib=1.1.0=pyhd3eb1b0_0
- jpeg=9b=he5867d9_2
- json5=0.9.6=pyhd3eb1b0_0
- jsonschema=4.4.0=py37hecd8cb5_0
- jupyter=1.0.0=py37hecd8cb5_8
- jupyter_client=7.3.5=py37hecd8cb5_0
- jupyter_console=6.4.3=pyhd3eb1b0_0
- jupyter_contrib_core=0.4.0=pyhd8ed1ab_0
- jupyter_contrib_nbextensions=0.5.1=pyhd8ed1ab_2
- jupyter_core=4.10.0=py37hecd8cb5_0
- jupyter_highlight_selected_word=0.2.0=py37_1000
- jupyter_latex_envs=1.4.6=pyhd8ed1ab_1002
- jupyter_nbextensions_configurator=0.4.1=pyhd8ed1ab_2
- jupyter_server=1.18.1=py37hecd8cb5_0
- jupyterlab=3.4.4=py37hecd8cb5_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.12.0=py37hecd8cb5_0
- jupyterlab_widgets=1.0.0=pyhd3eb1b0_1
- kiwisolver=1.4.2=py37he9d5cce_0
- krb5=1.19.2=hcd88c3b_0
- lame=3.100=h1de35cc_0
- lcms2=2.12=hf1fd2bf_0
- libbrotlicommon=1.0.9=hca72f7f_7
- libbrotlidec=1.0.9=hca72f7f_7
- libbrotlienc=1.0.9=hca72f7f_7
- libcurl=7.84.0=h6dfd666_0
- libcxx=14.0.6=h9765a3e_0
- libdeflate=1.10=h0d85af4_0
- libedit=3.1.20210910=hca72f7f_0
- libev=4.33=h9ed2024_1
- libffi=3.3=hb1e8313_2
- libgfortran=5.0.0=11_2_0_h246ff09_26
- libgfortran5=11.2.0=h246ff09_26
- libiconv=1.16=hca72f7f_2
- libidn2=2.3.2=h9ed2024_0
- libllvm11=11.1.0=h8fb7429_4
- libnghttp2=1.46.0=ha29bfda_0
- libpng=1.6.37=ha441bb4_0
- libsodium=1.0.18=h1de35cc_0
- libssh2=1.10.0=h0a4fc7d_0
- libtasn1=4.16.0=h9ed2024_0
- libtiff=4.1.0=hcb84e12_1
- libunistring=0.9.10=h9ed2024_0
- libuv=1.40.0=haf1e3a3_0
- libwebp=1.2.0=hacca55c_0
- libxml2=2.9.14=hbf8cd5e_0
- libxslt=1.1.35=h5b33f42_0
- libzlib=1.2.12=hfd90126_3
- llvm-openmp=14.0.6=h0dcd299_0
- llvmlite=0.39.1=py37h5d31d3a_0
- lxml=4.9.1=py37h65b224f_0
- lz4-c=1.9.3=h23ab428_1
- markupsafe=2.1.1=py37hca72f7f_0
- matplotlib=3.5.2=py37hecd8cb5_0
- matplotlib-base=3.5.2=py37hfb0c5b7_0
- matplotlib-inline=0.1.6=py37hecd8cb5_0
- mistune=0.8.4=py37h1de35cc_0
- mkl=2021.4.0=hecd8cb5_637
- mkl-service=2.4.0=py37h9ed2024_0
- mkl_fft=1.3.1=py37h4ab4a9b_0
- mkl_random=1.2.2=py37hb2f4e1b_0
- munkres=1.1.4=py_0
- nbclassic=0.3.5=pyhd3eb1b0_0
- nbclient=0.5.13=py37hecd8cb5_0
- nbconvert=6.4.4=py37hecd8cb5_0
- nbformat=5.5.0=py37hecd8cb5_0
- ncurses=6.3=hca72f7f_3
- nest-asyncio=1.5.5=py37hecd8cb5_0
- nettle=3.7.3=h230ac6f_1
- ninja=1.10.2=hecd8cb5_5
- ninja-base=1.10.2=haf03e11_5
- nltk=3.7=pyhd3eb1b0_0
- notebook=6.4.12=py37hecd8cb5_0
- numba=0.56.2=py37h7da6166_1
- numexpr=2.8.3=py37h2e5f0a9_0
- numpy=1.21.5=py37h2e5f0a9_3
- numpy-base=1.21.5=py37h3b1a694_3
- openh264=2.1.1=h8346a28_0
- openssl=1.1.1q=hfe4f2af_0
- opt_einsum=3.3.0=pyhd8ed1ab_1
- packaging=21.3=pyhd3eb1b0_0
- pandas=1.3.5=py37h743cdd8_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- pcre=8.45=h23ab428_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=9.2.0=py37hde71d04_1
- pip=22.1.2=py37hecd8cb5_0
- prometheus_client=0.14.1=py37hecd8cb5_0
- prompt-toolkit=3.0.20=pyhd3eb1b0_0
- prompt_toolkit=3.0.20=hd3eb1b0_0
- psutil=5.9.0=py37hca72f7f_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.11.2=pyhd3eb1b0_0
- pyopenssl=22.0.0=pyhd3eb1b0_0
- pyparsing=3.0.9=py37hecd8cb5_0
- pyqt=5.9.2=py37h655552a_2
- pyro-api=0.1.2=pyhd8ed1ab_0
- pyro-ppl=1.7.0=pyhd8ed1ab_0
- pyrsistent=0.18.0=py37hca72f7f_0
- pysam=0.19.1=py37h64e44a1_0
- pysocks=1.7.1=py37hecd8cb5_0
- python=3.7.13=hdfd78df_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py37hecd8cb5_0
- python_abi=3.7=2_cp37m
- pytorch=1.8.1=py3.7_0
- pytz=2022.1=py37hecd8cb5_0
- pyyaml=6.0=py37hca72f7f_1
- pyzmq=23.2.0=py37he9d5cce_0
- qt=5.9.7=h468cd18_1
- qtconsole=5.3.2=py37hecd8cb5_0
- qtpy=2.2.0=py37hecd8cb5_0
- readline=8.1.2=hca72f7f_1
- regex=2022.3.15=py37hca72f7f_0
- requests=2.27.1=pyhd3eb1b0_0
- scikit-learn=1.0.2=py37hae1ba45_1
- scipy=1.7.3=py37h214d14d_2
- seaborn=0.11.2=pyhd3eb1b0_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=63.4.1=py37hecd8cb5_0
- sip=4.19.8=py37h0a44026_0
- six=1.16.0=pyhd3eb1b0_1
- sniffio=1.2.0=py37hecd8cb5_1
- soupsieve=2.3.1=pyhd3eb1b0_0
- sqlite=3.39.2=h707629a_0
- terminado=0.13.1=py37hecd8cb5_0
- testpath=0.6.0=py37hecd8cb5_0
- threadpoolctl=2.2.0=pyh0d69192_0
- tk=8.6.12=h5d9f67b_0
- torchvision=0.9.1=py37_cpu
- tornado=6.2=py37hca72f7f_0
- tqdm=4.64.1=pyhd8ed1ab_0
- traitlets=5.1.1=pyhd3eb1b0_0
- typing-extensions=4.3.0=py37hecd8cb5_0
- typing_extensions=4.3.0=py37hecd8cb5_0
- urllib3=1.26.9=py37hecd8cb5_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py37_1
- websocket-client=0.58.0=py37hecd8cb5_4
- wheel=0.37.1=pyhd3eb1b0_0
- widgetsnbextension=3.5.2=py37hecd8cb5_0
- xz=5.2.5=hca72f7f_1
- yaml=0.2.5=haf1e3a3_0
- zeromq=4.3.4=h23ab428_0
- zipp=3.8.0=py37hecd8cb5_0
- zlib=1.2.12=h4dc903c_3
- zstd=1.4.9=h322a384_0
prefix: /Users/sumishunsuke/miniconda3/envs/genzyme_ngs