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13 Open 30 Closed
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Issues list

create_phylogeny_And_Heatmap_image bad headers bug Something isn't working
#66 opened Dec 18, 2024 by fredjaya
1
classify_trycycler does not output barcode08_for_reconciliation/* bug Something isn't working
#65 opened Dec 18, 2024 by fredjaya
@fredjaya
Combined phylogenetic tree and AMR/virulence heatmap rendering poorly bug Something isn't working
#64 opened Nov 29, 2024 by georgiesamaha
1
plassembler: insufficient read depth bug Something isn't working
#62 opened Nov 6, 2024 by fredjaya
Implement solution for managing low-coverage samples enhancement New feature or request
#59 opened Oct 10, 2024 by georgiesamaha
Clarify requirement to export singularity cache variables documentation Improvements or additions to documentation enhancement New feature or request
#53 opened Sep 6, 2024 by georgiesamaha
Testing with nf-test enhancement New feature or request
#34 opened Jul 29, 2024 by georgiesamaha
Add some test data enhancement New feature or request
#33 opened Jul 29, 2024 by georgiesamaha
Remove requirement to provide ONT summary sequencing file as file path
#26 opened Jul 24, 2024 by georgiesamaha
Should we generate BUSCO plots? enhancement New feature or request
#25 opened Jul 24, 2024 by georgiesamaha
Should we add a process for visualising assembly graphs with Bandage? enhancement New feature or request
#24 opened Jul 23, 2024 by georgiesamaha
Porechop is abadonware
#22 opened Jul 22, 2024 by georgiesamaha
1
Krona plots for kraken2
#11 opened Jun 21, 2024 by georgiesamaha
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