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*maniacal cackling*
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*maniacal cackling*
88 followers · 58 following

Achievements

Achievement: Starstruckx2Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Achievements

Achievement: Starstruckx2Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Organizations

@ash-dieback-crowdsource @BioJulia @slidewinder

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TransGirlCodes/README.md

Welcome to my GitHub Page

About me

Career

  • Academia
    • PhD in Evolutionary Genomics.
      • The role genetic exchange and gene flow play in the adaptation of organisms to dynamic environments or situations such as "evolutionary arms-races".
    • Bioinformatician working on a wide range of problems and projects:
      • Population genomics of fungi using HiFi read data to construct de-novo genomes.
      • Development of a hybrid genome assembler framework.
      • Assembling complex polyploid genomes.
      • Assembling pangenomes.
  • Industry
    • Software and Infrastructure developer for Actuarial and Financial departments for a well-known UK GI Company.

Highlighted work

Software projects

  • BioJulia - Software infrastructure for Genomics & Bioinformatics
  • HybridCheck - R package for scripting scans for recombination regions in sequences.

Pinned Loading

  1. BioJulia/BioSequences.jl BioJulia/BioSequences.jl Public

    Biological sequences for the julia language

    Julia 151 48

  2. vanOosterhoutLab/HybridCheck vanOosterhoutLab/HybridCheck Public

    HybridCheck, an R package for quickly scripting scans of sequence data for recombination regions.

    R 15 6

  3. BioJulia/Kmers.jl BioJulia/Kmers.jl Public

    In development: Kmer types and methods for julia

    Julia 22 7