FINISHED GROUPED_CORR METHOD

Transconnectome · Aug 3, 2022 · e73054b · e73054b
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commit e73054b
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diff --git a/.ipynb_checkpoints/age_correlation_sample_code-checkpoint.ipynb b/.ipynb_checkpoints/age_correlation_sample_code-checkpoint.ipynb
@@ -3,7 +3,7 @@
   {
    "cell_type": "code",
    "execution_count": 14,
-   "id": "2ea013dd",
+   "id": "a3560a28",
    "metadata": {},
    "outputs": [
     {
@@ -80,7 +80,7 @@
   {
    "cell_type": "code",
    "execution_count": 13,
-   "id": "bf04bae8",
+   "id": "a25c7d93",
    "metadata": {},
    "outputs": [
     {
@@ -593,24 +593,73 @@
   },
   {
    "cell_type": "markdown",
-   "id": "83d19947",
+   "id": "6bcd83a4",
    "metadata": {},
    "source": [
     "### Playing Around"
    ]
   },
   {
    "cell_type": "markdown",
-   "id": "17fd4454",
+   "id": "f0123236",
    "metadata": {},
    "source": [
     "### 1. correlation"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": 54,
+   "id": "baaef0fd",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "<class 'pandas.core.series.Series'>\n",
+      "Index(['NDARINV003RTV85', 'NDARINV007W6H7B', 'NDARINV00BD7VDC',\n",
+      "       'NDARINV00CY2MDM', 'NDARINV00LH735Y', 'NDARINV00LJVZK2',\n",
+      "       'NDARINV00NPMHND', 'NDARINV00R4TXET', 'NDARINV00U4FTRU',\n",
+      "       'NDARINV00UMK5VC',\n",
+      "       ...\n",
+      "       'NDARINVZZ6ZJ2KY', 'NDARINVZZ81LEEV', 'NDARINVZZFG6J5U',\n",
+      "       'NDARINVZZJ3A7BK', 'NDARINVZZL0VA2F', 'NDARINVZZLZCKAY',\n",
+      "       'NDARINVZZNX6W2P', 'NDARINVZZPKBDAC', 'NDARINVZZZ2ALR6',\n",
+      "       'NDARINVZZZNB0XC'],\n",
+      "      dtype='object', name='subjectkey', length=10243)\n"
+     ]
+    },
+    {
+     "data": {
+      "text/plain": [
+       "Index(['nihtbx_totalcomp_uncorrected', 'nihtbx_fluidcomp_uncorrected',\n",
+       "       'nihtbx_pattern_uncorrected', 'nihtbx_picture_uncorrected',\n",
+       "       'nihtbx_list_uncorrected', 'nihtbx_flanker_uncorrected',\n",
+       "       'nihtbx_cardsort_uncorrected', 'nihtbx_cryst_uncorrected',\n",
+       "       'nihtbx_reading_uncorrected', 'nihtbx_picvocab_uncorrected', 'age',\n",
+       "       'female', 'race.ethnicity', 'high.educ', 'income', 'married',\n",
+       "       'abcd_site', 'vol', 'height', 'weight', 'BMI'],\n",
+       "      dtype='object')"
+      ]
+     },
+     "execution_count": 54,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "print(type(merged_data['age']))\n",
+    "series = merged_data['age']\n",
+    "print(series.index)\n",
+    "#type(merged_data)\n",
+    "merged_data.columns"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": 36,
-   "id": "65da4757",
+   "id": "e8ec328d",
    "metadata": {
     "scrolled": false
    },
@@ -800,7 +849,7 @@
   {
    "cell_type": "code",
    "execution_count": 43,
-   "id": "21e1bf58",
+   "id": "8ee0ab63",
    "metadata": {},
    "outputs": [
     {
@@ -838,7 +887,7 @@
   {
    "cell_type": "code",
    "execution_count": 41,
-   "id": "e7fba777",
+   "id": "aea780a5",
    "metadata": {},
    "outputs": [
     {
@@ -1006,7 +1055,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "7bd27df8",
+   "id": "cdaa6c87",
    "metadata": {},
    "source": [
     "### 2. regression"
@@ -1015,7 +1064,7 @@
   {
    "cell_type": "code",
    "execution_count": 46,
-   "id": "277f4204",
+   "id": "c7bc3159",
    "metadata": {},
    "outputs": [
     {
@@ -1217,23 +1266,23 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "17496d01",
+   "id": "7462ceec",
    "metadata": {},
    "outputs": [],
    "source": []
   },
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "0574a801",
+   "id": "f6a4ba2e",
    "metadata": {},
    "outputs": [],
    "source": []
   },
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "9e770829",
+   "id": "085430d4",
    "metadata": {},
    "outputs": [],
    "source": []
@@ -1488,7 +1537,7 @@
   {
    "cell_type": "code",
    "execution_count": 35,
-   "id": "bcdfe181",
+   "id": "0e4240d9",
    "metadata": {},
    "outputs": [
     {
@@ -1959,7 +2008,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "1bfd046a",
+   "id": "127aa148",
    "metadata": {},
    "source": [
     "## playing fun"
@@ -1968,7 +2017,7 @@
   {
    "cell_type": "code",
    "execution_count": 15,
-   "id": "3535606d",
+   "id": "ce0bb2f5",
    "metadata": {},
    "outputs": [
     {
@@ -2041,7 +2090,7 @@
   {
    "cell_type": "code",
    "execution_count": 22,
-   "id": "ace9276e",
+   "id": "cb660bdd",
    "metadata": {},
    "outputs": [
     {
@@ -2092,7 +2141,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "9b408713",
+   "id": "94530516",
    "metadata": {},
    "outputs": [],
    "source": []