update hw5.Rmd link to lab12

website/content/assignment/13-hw5.Rmd

@@ -16,4 +16,4 @@ This assignment is due by midnight Pacific time, December 2nd, 2022
 
 3. Rename your final project website by modifying the relevant text in the `.yml` configuration file and the YAML header in the `index.Rmd` file. You may also modify the name of your GitHub repo so that the website url also provides a descriptive name.
 
-**Extra Credit**: Create content across 2 pages on your website. You can use the example content from [Lab 12](https://github.com/AbigailHorn/PM566-final-project) as an example.
+**Extra Credit**: Create content across 2 pages on your website. You can use the example content from [Lab 12](https://github.com/ksiegmund/PM566-lab12-example) as an example.

website/content/assignment/13-hw5.html

@@ -17,5 +17,5 @@ <h2>Interactive Visualization I and II</h2>
 <li><p>Include the visualizations created in (1) on your final project website hosted on <code>GitHub Pages</code>.</p></li>
 <li><p>Rename your final project website by modifying the relevant text in the <code>.yml</code> configuration file and the YAML header in the <code>index.Rmd</code> file. You may also modify the name of your GitHub repo so that the website url also provides a descriptive name.</p></li>
 </ol>
-<p><strong>Extra Credit</strong>: Create content across 2 pages on your website. You can use the example content from <a href="https://github.com/AbigailHorn/PM566-final-project">Lab 12</a> as an example.</p>
+<p><strong>Extra Credit</strong>: Create content across 2 pages on your website. You can use the example content from <a href="https://github.com/ksiegmund/PM566-lab12-example">Lab 12</a> as an example.</p>
 </div>

website/static/slides/12-interactive-viz2/libs/header-attrs-2.14/header-attrs.js

@@ -0,0 +1,12 @@
+// Pandoc 2.9 adds attributes on both header and div. We remove the former (to
+// be compatible with the behavior of Pandoc < 2.8).
+document.addEventListener('DOMContentLoaded', function(e) {
+  var hs = document.querySelectorAll("div.section[class*='level'] > :first-child");
+  var i, h, a;
+  for (i = 0; i < hs.length; i++) {
+    h = hs[i];
+    if (!/^h[1-6]$/i.test(h.tagName)) continue;  // it should be a header h1-h6
+    a = h.attributes;
+    while (a.length > 0) h.removeAttribute(a[0].name);
+  }
+});

website/static/slides/12-interactive-viz2/libs/remark-css-0.0.1/default.css

@@ -41,7 +41,7 @@ a, a > code {
   float: right;
   width: 47%;
 }
-.pull-right ~ * {
+.pull-right + * {
   clear: both;
 }
 img, video, iframe {

website/static/slides/12-interactive-viz2/slides.Rmd

@@ -76,18 +76,18 @@ opts_chunk$set(
 
 # Schedule 
 
-**11/12 Lecture 11 (Last week)**:
+**Lecture 11 (Last week)**:
   - Creating interactive graphs with **plotly** for R package and tables with **DataTable**
 
-**11/19 Lecture 12 (Today)**: 
-  - Create a website using R Markdown and GitHub Pages (like [this](https://abigailhorn.github.io/PM566-final-project/)!)
+**Lecture 12 (Today)**: 
+  - Create a website using R Markdown and GitHub Pages (like [this](https://ksiegmund.github.io/PM566-lab12-example/)!)
   - Share interactive plots on the website
-  - Note: [Assignment due (hpc and sql)](PM566/content/assignment/11-hw4.html)
+  - Note: [Assignment due Friday (hpc and sql)](https://uscbiostats.github.io/PM566/assignment/11-hw4/)
 
-**11/26 Thanksgiving Holiday**
+**11/23 Thanksgiving Holiday**
 
-**12/3 Lecture 13 Final Project Workshop**
-  - Note: [Assignment due (interactive viz I and II)](PM566/content/assignment/13-hw5.html)
+**11/30 Lecture 13 Final Project Workshop**
+  - Note: [Assignment due Dec 2 (interactive viz I and II)](https://uscbiostats.github.io/PM566/assignment/13-hw5/)
 
 ---
 

website/static/slides/12-interactive-viz2/slides.html

@@ -4,17 +4,23 @@
     <title>Interactive Visualization 2: Building Websites</title>
     <meta charset="utf-8" />
     <meta name="author" content="Abigail Horn" />
-    <script src="libs/header-attrs-2.11/header-attrs.js"></script>
+    <script src="libs/header-attrs-2.14/header-attrs.js"></script>
     <link href="libs/remark-css-0.0.1/default.css" rel="stylesheet" />
     <link href="libs/remark-css-0.0.1/default-fonts.css" rel="stylesheet" />
   </head>
   <body>
     <textarea id="source">
 class: center, middle, title-slide
 
+.title[
 # Interactive Visualization 2: Building Websites
+]
+.subtitle[
 ## PM 566: Introduction to Health Data Science
+]
+.author[
 ### Abigail Horn
+]
 
 ---
 
@@ -56,18 +62,18 @@
 
 # Schedule 
 
-**11/12 Lecture 11 (Last week)**:
+**Lecture 11 (Last week)**:
   - Creating interactive graphs with **plotly** for R package and tables with **DataTable**
 
-**11/19 Lecture 12 (Today)**: 
-  - Create a website using R Markdown and GitHub Pages (like [this](https://abigailhorn.github.io/PM566-final-project/)!)
+**Lecture 12 (Today)**: 
+  - Create a website using R Markdown and GitHub Pages (like [this](https://ksiegmund.github.io/PM566-lab12-example/)!)
   - Share interactive plots on the website
-  - Note: [Assignment due (hpc and sql)](PM566/content/assignment/11-hw4.html)
+  - Note: [Assignment due Friday (hpc and sql)](https://uscbiostats.github.io/PM566/assignment/11-hw4/)
 
-**11/26 Thanksgiving Holiday**
+**11/23 Thanksgiving Holiday**
 
-**12/3 Lecture 13 Final Project Workshop**
-  - Note: [Assignment due (interactive viz I and II)](PM566/content/assignment/13-hw5.html)
+**11/30 Lecture 13 Final Project Workshop**
+  - Note: [Assignment due Dec 2 (interactive viz I and II)](https://uscbiostats.github.io/PM566/assignment/13-hw5/)
 
 ---
 
@@ -916,6 +922,19 @@
     deleted = true;
   });
 })();
+// add `data-at-shortcutkeys` attribute to <body> to resolve conflicts with JAWS
+// screen reader (see PR #262)
+(function(d) {
+  let res = {};
+  d.querySelectorAll('.remark-help-content table tr').forEach(tr => {
+    const t = tr.querySelector('td:nth-child(2)').innerText;
+    tr.querySelectorAll('td:first-child .key').forEach(key => {
+      const k = key.innerText;
+      if (/^[a-z]$/.test(k)) res[k] = t;  // must be a single letter (key)
+    });
+  });
+  d.body.setAttribute('data-at-shortcutkeys', JSON.stringify(res));
+})(document);
 (function() {
   "use strict"
   // Replace <script> tags in slides area to make them executable