Update testManualInputs.yml #19
Workflow file for this run
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| ### https://github.com/actions/upload-artifact | |
| ### https://github.blog/changelog/2021-11-10-github-actions-input-types-for-manual-workflows/ | |
| ### https://docs.github.com/en/actions/using-workflows/caching-dependencies-to-speed-up-workflows | |
| ### https://github.com/r-lib/actions/tree/v2/setup-r-dependencies | |
| ### https://docs.github.com/en/actions/using-jobs/using-conditions-to-control-job-execution | |
| ### For uploading artifacts: | |
| ### "path:" is the output path where Pandoc will write the compiled PDF. | |
| ### Note, this should be the same directory as the input paper.md | |
| name: Compile main FrEDI Data | |
| on: [push] | |
| # on: | |
| # push: | |
| # inputs: | |
| # update: | |
| # type: choice | |
| # description: Update sysdata.rda | |
| # options: | |
| # - no | |
| # - yes | |
| jobs: | |
| compile_data: | |
| runs-on: ubuntu-latest | |
| name: Process Data | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| - name: Setup R package dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache: true | |
| cache-version: 1 | |
| packages: | | |
| any::tidyverse | |
| any::openxlsx | |
| - name: Run createsystemData | |
| run: | | |
| Rscript -e 'require(tidyverse)' | |
| Rscript -e 'getwd() |> print()' | |
| Rscript -e '"." |> list.files()' | |
| Rscript -e '"./scripts" |> list.files()' | |
| Rscript -e 'source("./scripts/createSystemData_main.R")' | |
| - name: Upload Tests | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Data | |
| path: | | |
| ./data_tests/ | |
| ./data/tmp_sysdata.rda | |
| # - name: Update Data | |
| # if: github.event.inputs.update == 'yes' | |
| # run: | | |
| # Rscript -e 'file.copy(from="./data/tmp_sysdata.rda", to="./data/sysdata.rda")' | |
| # Rscript -e 'file.remove("./data/tmp_sysdata.rda")' | |
| # - name: Commit results | |
| # run: | | |
| # git config --local core.autocrlf false | |
| # git config --local user.email "${{ github.actor }}@users.noreply.github.com" | |
| # git config --local user.name "${{ github.actor }}" | |
| # git add data/sysdata** | |
| # git pull origin ${{ github.head_ref }} --autostash --rebase -X ours | |
| # git commit -a -m "Compiled main FrEDI data" | |
| # git push | |