Also updated naming conventions in state data files to match new functions

Added some packages to DESCRIPTION and fixed indentations

Made small edits to loadData, reshapeData, and createSystemData to improve the outputs of createSystemData, particularly at the state-level

Created wrapper function for configureSystemData.R

State data initial

Changed names for configureSystemData output list

Fixed some lines of code related to fredi_config

Updated system data with region and state-level data

State code initial kmn

State code initial

Updated state-level scaled impacts so that model, variant, impact year, and impact type values would match appropriate values for reshaping and configuring data

Corrected steps in reshapeData for state-level processing.

Updated config utils to test state-level scaled impact plots

Updated reshapeData to fix steps for reshaping scalarDataframe for state-level data

Updated temporary system data

State-level fixes

 into initial_state_testing

Implemented fixes to get run_fredi in FrEDI repo to run successfully

…_initial_testing

Fixed issue with `loadStateScaledImpacts`: looking for files with a capital "I" in "scaledImpacts"

Fixed an issue with the label for the Reactive/Reasonable variant

Fixed issues with state-level data, particularly region values for df_defaultScenario, data_scaledImpacts and slrImpacts

Changed some code related to fredi_config list
Corrected function for extending SLR data (previously calling some function (?) called `extend_data`...now using `extend_slr`

Updated configured data

Renamed "loadStateScaledImpacts" to "loadStateImpacts" in utils_state.R. Added functions to help combine state & region data
In reshapeData: improved code for consistency between region & state-level data
In createSystemData: Added steps to group initial sector results by region or state, depending on whether data is by state or by region
In configureSystemData: Updated workflow to combine reshaped state & region data and then configure the combined data
Updated tmp_sysdata.rda

Initialized fix for SLR values

Initialized changes to creating initial results during configuration step

…d_kmn_slrFix

Added argument `extend_all` to createSystemData and configureSystemData functions to make it easier to change whether we extend all models or just some models when creating impact functions

…lrFix

Initialized some fixes to the combined data branch
These fixes fix some things and break others (national level scalars not processing correctly...not sure if it is on this side or the FrEDI code side)

Added missing 2010 values for both MH scalars

Pull in workflows

This reverts commit dcefe8f.

Made fixes to test-related functions to create plots for combined region- and state-level data

Merging fix for SLR sectors, scaled impact plots for combined region- and state-level data

Merging initial state level testing workflow into initial code branch

Merge pull request #45 from USEPA/state_code_initial

Add additional sectors to initial state code branch

Updated FrEDI config with additional SLR scalar info

Changed Excel ID for "No Adaptation" to "NoAdapt"
Changed byState = 1 to byState = 0 for Wildfire (need to fix missing states for Response Cost impact type)

Removed data for Wildfire (need to correct missing states for wildfire "Response Costs" impact type)

Corrected variant ids for reactive and proactive variants for Rail and Roads sectors to match values in control tables

Commented out print statement

Added line to only plot models present in data

Added statements for QCing

Updated tmp_sysdata.rda with all sectors

Removed sectors that have not yet been fully QCed at the state-level

State code combined

State code initial kmn

 into state_code_initial