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Fix Julia compilation error when using IFT in a singularity container #100
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #100 +/- ##
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Coverage 94.88% 94.88%
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Files 7 7
Lines 215 215
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Hits 204 204
Misses 11 11 ☔ View full report in Codecov by Sentry. |
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This looks good to me. I noticed that you changed the Julia version as well as adding the environment variable. Was the change to the Julia version not enough on its own?
I does still throw the error even with the Julia version pinned, so it seems like the issue is not from a Julia update. Would it be best to go back to |
This PR attempts to fix the problem behavior when running a Cylc flow on Oscar, the landmask task throws an error when trying to use Julia in the Docker image.
ERROR: LoadError: IOError: mkdir("/.julia"; mode=0o777): read-only file system (EROFS)
I also made a few small updates for some Cylc tasks for maintenance. After the Oscar upgrade, preprocess seemed to fail OOM so I used the
--mem-per-cpu
flag to make sure the task doesn't die. I will make updates to thetracker
task in a separate PR (see #103).