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fix(workflow): H5 Export not run #215

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merged 6 commits into from
Jan 24, 2025
Merged

fix(workflow): H5 Export not run #215

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d91dbe6
fix(workflow): re-add missing exportH5 task
hollandjg Jan 22, 2025
fc41dd1
fix(workflow): simplify passtime emitted to file
hollandjg Jan 22, 2025
365556d
refactor(workflow): remove -o short option from h5 single CLI
hollandjg Jan 22, 2025
bcd80d3
Merge branch 'docs(workflow)--add-larger-examples' into fix(workflow)…
hollandjg Jan 24, 2025
a0f773a
Merge branch 'docs(workflow)--add-larger-examples' into fix(workflow)…
hollandjg Jan 24, 2025
b3e4650
Merge branch 'main' into fix(workflow)--tracking-not-run
hollandjg Jan 24, 2025
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2 changes: 1 addition & 1 deletion IFTPipeline.jl/src/cli.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -340,7 +340,7 @@ function mkclimakeh5_single!(settings)
required = true
arg_type = String

"--output", "-o"
"--output"
help = "Output file"
required = true
end
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4 changes: 2 additions & 2 deletions workflow/flow.cylc
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Expand Up @@ -17,7 +17,7 @@
"""
P1D = """
get_all_overpass_times[^] => get_single_overpass_time<satellite>
INIT[^]:succeed-all => LOAD:succeed-all => PREPROCESS:succeed-all => exportH5 => done
INIT[^]:succeed-all => LOAD:succeed-all => PREPROCESS:succeed-all => exportH5<satellite> => done
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done[-P1D] => done

"""
Expand Down Expand Up @@ -290,7 +290,7 @@
# Package intermediate and final outputs into HDF5 files
script = """
${IFT} makeh5files_single \
--passtime `cat ${overpass_time_file}` \
--passtime "$(cat ${overpass_time_file} | tr -d 'Z\n\r')" \
--truecolor ${truecolor_file} \
--falsecolor ${falsecolor_file} \
--labeled ${labeled_file} \
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