[Notebooks] add Torch Geometric dependency to graph encoders #173

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Job	Run time
build (ubuntu-latest, 3.8)	4m 33s
build (ubuntu-latest, 3.9)	3m 27s
build (ubuntu-latest, 3.10)	3m 57s
build (macos-latest, 3.8)	4m 56s
build (macos-latest, 3.9)	5m 21s
build (macos-latest, 3.10)	7m 21s
build (windows-latest, 3.8)	11m 1s
build (windows-latest, 3.9)	4m 15s
build (windows-latest, 3.10)	6m 49s
	51m 40s