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first mapping automation
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aegis301 committed Jul 19, 2024
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17 changes: 17 additions & 0 deletions concepts/Adrenaline_dosage.yml
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description: ''
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '221289'
schema: mimiciv_icu
table: inputevents
source: mimiciv
unit: ''
name: Adrenaline_dosage
unit: ug/kg/min
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/Age.yml
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description: Patient's age
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: ''
schema: mimiciv_derived
table: age
source: mimiciv
unit: ''
name: Age
unit: years
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/AirwayPlateauPressure.yml
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description: Airway Plateau Pressure of a patient
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '224696'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: AirwayPlateauPressure
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/BodyHeight.yml
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description: Height of a patient's body
identifiers:
loinc: 8302-2
snomed: '1153637007'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '226730'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: BodyHeight
unit: cm
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/BodyTemperature.yml
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description: Temperature of a patient's body, irrespective of site
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '223762'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: BodyTemperature
unit: "\xB0C"
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/BodyWeight.yml
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description: Weight of a patien's body
identifiers:
loinc: 29463-7
snomed: '27113001'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '224639'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: BodyWeight
unit: kg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/BreathingRate.yml
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description: Actual breathing rate of patient
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '224690'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: BreathingRate
unit: 1/min
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/Creatinine_absolute_serum.yml
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description: ''
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220615'
schema: mimic_hosp
table: labevents
source: mimiciv
unit: ''
name: Creatinine_absolute_serum
unit: mg/dl
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/DiastolicBloodPressue_Arterial_Invasive.yml
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description: Diastolic arterial pressure of a patient
identifiers:
loinc: 76213-8
snomed: '251073000'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220051'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: DiastolicBloodPressue_Arterial_Invasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/DiastolicBloodPressue_Arterial_noninvasive.yml
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description: Diastolic venous pressure of a patient
identifiers:
loinc: ''
snomed: '251074006'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220180'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: DiastolicBloodPressue_Arterial_noninvasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/Dobutamine_dosage.yml
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description: ''
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '221653'
schema: mimiciv_icu
table: inputevents
source: mimiciv
unit: ''
name: Dobutamine_dosage
unit: ug/kg/min
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/FiO2.yml
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description: Inspired oxygen concentration of a patient
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '223835'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: FiO2
unit: 1/1
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/Gender.yml
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description: Patient's gender
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '226228'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: Gender
unit: ''
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/MeanBloodPressue_Arterial_Invasive.yml
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description: Mean arterial pressure of a patient
identifiers:
loinc: ''
snomed: '251075007'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220052'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: MeanBloodPressue_Arterial_Invasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/MeanBloodPressue_Arterial_Noninvasive.yml
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description: Diastolic venous pressure of a patient
identifiers:
loinc: ''
snomed: '174255007'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220181'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: MeanBloodPressue_Arterial_Noninvasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/Norepinephrine_dosage.yml
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description: ''
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '221906'
schema: mimiciv_icu
table: inputevents
source: mimiciv
unit: ''
name: Norepinephrine_dosage
unit: ug/kg/min
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/OxygenSaturation_Peripheral.yml
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description: Oxygen Saturation, irrespective of sample site
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220227'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: OxygenSaturation_Peripheral
unit: '%'
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/PEEP.yml
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description: Positive end-expiratory pressure
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '224700'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: PEEP
unit: cm H2O
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/SystolicBloodPressure_Arterial_Invasive.yml
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description: Systolic arterial pressure of a patient
identifiers:
loinc: 76215-3
snomed: '251071003'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220050'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: SystolicBloodPressure_Arterial_Invasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/SystolicBloodPressure_Arterial_noninvasive.yml
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description: Systolic venous pressure of a patient
identifiers:
loinc: ''
snomed: '251070002'
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '220179'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: SystolicBloodPressure_Arterial_noninvasive
unit: mmHg
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/TidalVolume.yml
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description: Actual tidal volume of a patient
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: '224685'
schema: mimiciv_icu
table: chartevents
source: mimiciv
unit: ''
name: TidalVolume
unit: ml
upper_limit: 300
17 changes: 17 additions & 0 deletions concepts/UrineVolume.yml
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description: Urine Volume measured at a certain point in time
identifiers:
loinc: ''
snomed: ''
lower_limit: 0
mapper:
- klass: MimicObservationMapper
params:
constraints:
itemid: ''
schema: mimiciv_derived
table: urineoutput
source: mimiciv
unit: ''
name: UrineVolume
unit: ml
upper_limit: 300
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