Fix non linux build error

algbio · Jan 12, 2025 · e3e5848 · e3e5848
1 parent 648f82e
commit e3e5848
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Showing 17 changed files with 20 additions and 18 deletions.
diff --git a/Cargo.lock b/Cargo.lock
diff --git a/crates/api/Cargo.toml b/crates/api/Cargo.toml
@@ -24,7 +24,7 @@ colors = { package = "ggcat_colors", path = "../colors" }
 utils = { package = "ggcat_utils", path = "../utils" }
 
 fdlimit = "0.3.0"
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 rayon = "1.10.0"
 dynamic-dispatch = "0.5.4"
 parking_lot = "0.12.3"

diff --git a/crates/assembler/Cargo.toml b/crates/assembler/Cargo.toml
@@ -15,7 +15,7 @@ utils = { package = "ggcat_utils", path = "../utils" }
 dynamic-dispatch = "0.5.4"
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/assembler_kmers_merge/Cargo.toml b/crates/assembler_kmers_merge/Cargo.toml
@@ -9,7 +9,7 @@ config = { package = "ggcat_config", path = "../config" }
 utils = { package = "ggcat_utils", path = "../utils" }
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/assembler_minimizer_bucketing/Cargo.toml b/crates/assembler_minimizer_bucketing/Cargo.toml
@@ -8,7 +8,7 @@ edition = "2021"
 config = { package = "ggcat_config", path = "../config" }
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 
 # Static dispatch

diff --git a/crates/cmdline/Cargo.toml b/crates/cmdline/Cargo.toml
@@ -50,7 +50,7 @@ dynamic-dispatch = "0.5.4"
 
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 io = { package = "ggcat_io", path = "../io" }
 colors = { package = "ggcat_colors", path = "../colors" }
 

diff --git a/crates/colors/Cargo.toml b/crates/colors/Cargo.toml
@@ -11,7 +11,7 @@ config = { package = "ggcat_config", path = "../config" }
 dynamic-dispatch = "0.5.4"
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/config/Cargo.toml b/crates/config/Cargo.toml
@@ -6,5 +6,5 @@ edition = "2021"
 
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 parking_lot = "0.12.3"
diff --git a/crates/dumper/Cargo.toml b/crates/dumper/Cargo.toml
@@ -11,7 +11,7 @@ config = { package = "ggcat_config", path = "../config" }
 utils = { package = "ggcat_utils", path = "../utils" }
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/io/Cargo.toml b/crates/io/Cargo.toml
@@ -16,7 +16,7 @@ utils = { package = "ggcat_utils", path = "../utils" }
 
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/kmers_transform/Cargo.toml b/crates/kmers_transform/Cargo.toml
@@ -9,7 +9,7 @@ config = { package = "ggcat_config", path = "../config" }
 utils = { package = "ggcat_utils", path = "../utils" }
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 hashes = { package = "ggcat_hashes", path = "../hashes" }

diff --git a/crates/minimizer_bucketing/Cargo.toml b/crates/minimizer_bucketing/Cargo.toml
@@ -8,7 +8,7 @@ edition = "2021"
 config = { package = "ggcat_config", path = "../config" }
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/querier/Cargo.toml b/crates/querier/Cargo.toml
@@ -15,7 +15,7 @@ utils = { package = "ggcat_utils", path = "../utils" }
 dynamic-dispatch = "0.5.4"
 
 # Common libraries
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 streaming-libdeflate-rs = "0.1.5"
 nightly-quirks = "0.1.4"
 

diff --git a/crates/structs/Cargo.toml b/crates/structs/Cargo.toml
@@ -7,7 +7,7 @@ bincode = "1.3.3"
 byteorder = "1.5.0"
 config = { package = "ggcat_config", path = "../config" }
 io = { package = "ggcat_io", path = "../io" }
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
 serde = { version = "1.0.203", features = ["derive"] }
 
 

diff --git a/crates/utils/Cargo.toml b/crates/utils/Cargo.toml
@@ -6,4 +6,4 @@ edition = "2021"
 parking_lot = "0.12.3"
 rand = "0.8.5"
 
-parallel-processor = "0.1.23"
+parallel-processor = "0.1.24"
diff --git a/libs-crates/parallel-processor-rs b/libs-crates/parallel-processor-rs
diff --git a/tests/build_checking.sh b/tests/build_checking.sh
@@ -1,6 +1,8 @@
 set -e
 mkdir -p target/checking
-export CARGO_TARGET_DIR=target/checking
+export CARGO_TARGET_DIR="$PWD/target/checking"
+
+pushd ../
 
 # cargo clean